Difference between revisions of "RXN-14272"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP GDP] == * smiles: ** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(N)=NC=...")
 
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP GDP] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14272 RXN-14272] ==
−
* smiles:
+
* direction:
−
** C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=QGWNDRXFNXRZMB-UUOKFMHZSA-K
+
 
* common name:
 
* common name:
−
** GDP
+
** (E)-hexadec-2-enoyl-CoA hydratase
−
* molecular weight:
+
* ec number:
−
** 440.179   
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
−
** ppG
 
−
** guanosine-5'-diphosphate
 
−
** guanosine-diphosphate
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[GDPKIN-RXN]]
+
* With identifiers:
−
* [[TransportSeed_GDP]]
+
** 1 [[CPD0-2117]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2232]][c]
−
* [[TRANS-RXN1HP7-45]]
+
* With common name(s):
−
* [[RXN0-748]]
+
** 1 trans-hexadec-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxyhexadecanoyl-CoA[c]
−
* [[GUANOSINE-DIPHOSPHATASE-RXN]]
+
 
−
* [[GDPREDUCT-RXN]]
+
== Genes associated with this reaction  ==
−
== Reaction(s) known to produce the compound ==
+
Genes have been associated with this reaction based on different elements listed below.
−
* [[RXN-5464]]
+
* Gene: [[CHC_T00009349001_1]]
−
* [[TransportSeed_GDP]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[RXN-5462]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[2.4.1.83-RXN]]
+
* Gene: [[CHC_T00009422001_1]]
−
* [[RXN-5463]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[2.4.1.142-RXN]]
+
* Gene: [[CHC_T00009110001_1]]
−
* [[RXN-16602]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[RXN0-5462]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[PPGPPSYN-RXN]]
+
* Gene: [[CHC_T00009190001_1]]
−
* [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[GUANYL-KIN-RXN]]
+
== Pathways  ==
−
* [[TRANS-RXN1HP7-45]]
+
* [[PWY-7656]], Spodoptera littoralis pheromone biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7656 PWY-7656]
−
== Reaction(s) of unknown directionality ==
+
** '''4''' reactions found over '''22''' reactions in the full pathway
−
* [[2.4.1.232-RXN]]
+
* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
−
* [[MANNPGUANYLTRANGDP-RXN]]
+
** '''5''' reactions found over '''11''' reactions in the full pathway
−
* [[URKI-RXN]]
+
== Reconstruction information  ==
−
* [[ExchangeSeed_GDP]]
+
* Category: [[orthology]]
−
* [[RXN-14117]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* CAS : 146-91-8
+
* RHEA:
−
* METABOLIGHTS : MTBLC58189
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31165 31165]
−
* PUBCHEM:
+
* LIGAND-RXN:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=21604868 21604868]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04738 R04738]
−
* HMDB : HMDB01201
+
{{#set: direction=LEFT-TO-RIGHT}}
−
* LIGAND-CPD:
+
{{#set: common name=(E)-hexadec-2-enoyl-CoA hydratase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C00035 C00035]
+
{{#set: ec number=EC-4.2.1.17}}
−
* CHEMSPIDER:
+
{{#set: gene associated=CHC_T00009349001_1|CHC_T00009422001_1|CHC_T00009110001_1|CHC_T00009190001_1}}
−
** [http://www.chemspider.com/Chemical-Structure.10239187.html 10239187]
+
{{#set: in pathway=PWY-7656|PWY-7654}}
−
* CHEBI:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58189 58189]
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
−
* BIGG : gdp
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: smiles=C(OP(=O)([O-])OP(=O)([O-])[O-])C1(OC(C(O)C(O)1)N3(C=NC2(C(=O)NC(N)=NC=23)))}}
+
−
{{#set: inchi key=InChIKey=QGWNDRXFNXRZMB-UUOKFMHZSA-K}}
+
−
{{#set: common name=GDP}}
+
−
{{#set: molecular weight=440.179    }}
+
−
{{#set: common name=ppG|guanosine-5'-diphosphate|guanosine-diphosphate}}
+
−
{{#set: consumed by=GDPKIN-RXN|TransportSeed_GDP|TRANS-RXN1HP7-45|RXN0-748|GUANOSINE-DIPHOSPHATASE-RXN|GDPREDUCT-RXN}}
+
−
{{#set: produced by=RXN-5464|TransportSeed_GDP|RXN-5462|2.4.1.83-RXN|RXN-5463|2.4.1.142-RXN|RXN-16602|RXN0-5462|PPGPPSYN-RXN|ADENYLOSUCCINATE-SYNTHASE-RXN|GUANYL-KIN-RXN|TRANS-RXN1HP7-45}}
+
−
{{#set: consumed or produced by=2.4.1.232-RXN|MANNPGUANYLTRANGDP-RXN|URKI-RXN|ExchangeSeed_GDP|RXN-14117}}
+

Latest revision as of 18:51, 9 January 2019

Reaction RXN-14272

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • (E)-hexadec-2-enoyl-CoA hydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 trans-hexadec-2-enoyl-CoA[c] + 1 H2O[c] => 1 (S)-3-hydroxyhexadecanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7656, Spodoptera littoralis pheromone biosynthesis: PWY-7656
    • 4 reactions found over 22 reactions in the full pathway
  • PWY-7654, (8E,10E)-dodeca-8,10-dienol biosynthesis: PWY-7654
    • 5 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-14272&oldid=23580"