Difference between revisions of "RXN-13443"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17796 RXN-17796] == * direction: ** LEFT-TO-RIGHT * common name: ** Putative Acyl-COA dehydroge...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17796 RXN-17796] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13443 RXN-13443] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** Putative Acyl-COA dehydrogenase
+
** 3-oxoacyl-[acyl-carrier-protein] reductase
 +
** 3-oxoacyl-(acyl-carrier-protein) reductase
 
* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8]
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** [http://enzyme.expasy.org/EC/1.1.1.330 EC-1.1.1.330]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[CPD-19148]][c] '''=>''' 1 [[CPD-19150]][c] '''+''' 1 [[ETF-Reduced]][c]
+
** 1 [[CPD-14423]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[CPD-14424]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
* With common name(s):
 
* With common name(s):
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** 1 H+[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 (5Z)-dodecenoyl-CoA[c] '''=>''' 1 (2E,5Z)-dodecenoyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c]
+
** 1 3-oxo-docosapentaenoyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] '''+''' 1 NAD(P)+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009166001]]
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* Gene: [[CHC_T00008477001]]
−
** ORIGINAL_GENOME
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** Source: [[annotation-original_genome]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[CHC_T00009166001_1]]
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* Gene: [[CHC_T00008496001]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008557001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
 +
** '''7''' reactions found over '''14''' reactions in the full pathway
 +
* [[PWY-7053]], docosahexaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7053 PWY-7053]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7727]], docosahexaenoate biosynthesis IV (4-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7727 PWY-7727]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-original_genome]]
−
*** [[original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Putative Acyl-COA dehydrogenase}}
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] reductase}}
−
{{#set: ec number=EC-1.3.8}}
+
{{#set: common name=3-oxoacyl-(acyl-carrier-protein) reductase}}
−
{{#set: gene associated=CHC_T00009166001|CHC_T00009166001_1}}
+
{{#set: ec number=EC-1.1.1.330}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=CHC_T00008477001|CHC_T00008496001|CHC_T00008557001_1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-7606|PWY-7053|PWY-7727}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 17:57, 9 January 2019

Reaction RXN-13443

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-[acyl-carrier-protein] reductase
    • 3-oxoacyl-(acyl-carrier-protein) reductase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-docosapentaenoyl-CoA[c] + 1 H+[c] + 1 NAD(P)H[c] => 1 (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA[c] + 1 NAD(P)+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 7 reactions found over 14 reactions in the full pathway
  • PWY-7053, docosahexaenoate biosynthesis I (lower eukaryotes): PWY-7053
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7727, docosahexaenoate biosynthesis IV (4-desaturase, mammals): PWY-7727
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] reductase" cannot be used as a page name in this wiki.




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