Difference between revisions of "RXN1F-147"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9700 CPD-9700] == * smiles: ** C=C1(C(CC(C(=O)[O-])NC(CCC([N+])C([O-])=O)=O)C1) * inchi key...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-147 RXN1F-147] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9700 CPD-9700] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-147 RXN1F-147] ==
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* smiles:
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* direction:
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** C=C1(C(CC(C(=O)[O-])NC(CCC([N+])C([O-])=O)=O)C1)
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=UYDZYCPIQSRXKU-NPPUSCPJSA-M
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** [http://enzyme.expasy.org/EC/5.5.1.18 EC-5.5.1.18]
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* common name:
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** hypoglycin B
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* molecular weight:
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** 269.277   
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* Synonym(s):
 
* Synonym(s):
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** hypoglycine B
 
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** L-gamma-glutamyl-L-hypoglycin
 
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** γ-glutamyl-β-(methylenecyclopropyl)-alanine
 
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** (2S)-2-amino-5-[[(2S)-1-hydroxy-3-[(1S)-2-methylidenecyclopropyl]-1-oxopropan-2-yl]amino]-5-oxopentanoic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-9157]]
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** 1 [[CPD1F-114]][c] '''=>''' 1 [[CPD1F-115]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 all-trans-lycopene[c] '''=>''' 1 δ-carotene[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008672001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00010245001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00002318001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009062001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00009499001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00010004001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00003979001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00009303001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00008813001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00008616001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00009401001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00009131001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00008663001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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* [[PWY-5946]], δ-carotene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5946 PWY-5946]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90658135 90658135]
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** [http://www.genome.jp/dbget-bin/www_bget?R06963 R06963]
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* Wikipedia : Hypoglycin_B
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: ec number=EC-5.5.1.18}}
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** [http://www.genome.jp/dbget-bin/www_bget?C08280 C08280]
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{{#set: gene associated=CHC_T00008672001_1|CHC_T00010245001_1|CHC_T00002318001_1|CHC_T00009062001_1|CHC_T00009499001_1|CHC_T00010004001_1|CHC_T00003979001_1|CHC_T00009303001_1|CHC_T00008813001_1|CHC_T00008616001_1|CHC_T00009401001_1|CHC_T00009131001_1|CHC_T00008663001_1}}
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* HMDB : HMDB29428
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{{#set: in pathway=PWY-5946}}
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{{#set: smiles=C=C1(C(CC(C(=O)[O-])NC(CCC([N+])C([O-])=O)=O)C1)}}
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{{#set: reconstruction category=orthology}}
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{{#set: inchi key=InChIKey=UYDZYCPIQSRXKU-NPPUSCPJSA-M}}
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{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: common name=hypoglycin B}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: molecular weight=269.277    }}
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{{#set: common name=hypoglycine B|L-gamma-glutamyl-L-hypoglycin|γ-glutamyl-β-(methylenecyclopropyl)-alanine|(2S)-2-amino-5-[[(2S)-1-hydroxy-3-[(1S)-2-methylidenecyclopropyl]-1-oxopropan-2-yl]amino]-5-oxopentanoic acid}}
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{{#set: produced by=RXN-9157}}
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Latest revision as of 17:01, 23 May 2018

Reaction RXN1F-147

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans-lycopene[c] => 1 δ-carotene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5946, δ-carotene biosynthesis: PWY-5946
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN1F-147&oldid=18864"