Difference between revisions of "RXN0-7238"

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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7238 RXN0-7238] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** glycine cleavage
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** long-chain-fatty-acid-CoA ligase
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* ec number:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** glycine cleavage system
 
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** glycine decarboxylase complex
 
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** gcv system
 
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** glycine cleavage complex
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''3''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[GCVP-RXN]]
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** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PROTON]][e] '''+''' 1 [[CPD-9247]][e] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-18346]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c]
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* [[GCVT-RXN]]
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* With common name(s):
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* [[RXN-8629]]
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** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 H+[e] '''+''' 1 cis-vaccenate[e] '''=>''' 1 AMP[c] '''+''' 1 cis-vaccenoyl-CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 H+[c]
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== Reaction(s) not found ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009428001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008811001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00009428001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008811001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008160001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008500001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
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{{#set: common name=long-chain-fatty-acid-CoA ligase}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: gene associated=CHC_T00009428001_1|CHC_T00008811001_1|CHC_T00009428001|CHC_T00008811001|CHC_T00008160001_1|CHC_T00008500001_1}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: in pathway=}}
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{{#set: common name=glycine cleavage}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: common name=glycine cleavage system|glycine decarboxylase complex|gcv system|glycine cleavage complex}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reaction found=3}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reaction not found=3}}
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{{#set: completion rate=100.0}}
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Latest revision as of 15:36, 9 January 2019

Reaction RXN0-7238

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long-chain-fatty-acid-CoA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 ATP[c] + 1 H+[e] + 1 cis-vaccenate[e] => 1 AMP[c] + 1 cis-vaccenoyl-CoA[c] + 1 diphosphate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN0-7238&oldid=20530"