Difference between revisions of "PWY-6545"

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[[Category:Pathway]]
 
[[Category:Pathway]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545] ==
 +
* common name:
 +
** pyrimidine deoxyribonucleotides de novo biosynthesis III
 
* taxonomic range:
 
* taxonomic range:
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5782 TAX-5782]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-10239 TAX-10239]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
−
* common name:
 
−
** spermidine biosynthesis III
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''1''' reactions found over '''4''' reactions in the full pathway
+
  '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[SAMDECARB-RXN]]
+
* [[CDPREDUCT-RXN]]
 +
** 4 associated gene(s):
 +
*** [[CHC_T00008864001_1]]
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*** [[CHC_T00008864001]]
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*** [[CHC_T00008926001]]
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*** [[CHC_T00008926001_1]]
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** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[DCDPKIN-RXN]]
 +
** 4 associated gene(s):
 +
*** [[CHC_T00009258001_1]]
 +
*** [[CHC_T00009233001]]
 +
*** [[CHC_T00009258001]]
 +
*** [[CHC_T00009233001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[DTDPKIN-RXN]]
 +
** 4 associated gene(s):
 +
*** [[CHC_T00009233001_1]]
 +
*** [[CHC_T00009258001_1]]
 +
*** [[CHC_T00009258001]]
 +
*** [[CHC_T00009233001]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[DTMPKI-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00002059001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[DUDPKIN-RXN]]
 +
** 4 associated gene(s):
 +
*** [[CHC_T00009258001]]
 +
*** [[CHC_T00009233001_1]]
 +
*** [[CHC_T00009258001_1]]
 +
*** [[CHC_T00009233001]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[DUTP-PYROP-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_T00009365001_1]]
 +
*** [[CHC_T00002427001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN-12195]]
 +
** 7 associated gene(s):
 +
*** [[CHC_T00001236001_1]]
 +
*** [[CHC_T00010157001_1]]
 +
*** [[CHC_T00004941001_1]]
 +
*** [[CHC_T00000060001_1]]
 +
*** [[CHC_T00007176001_1]]
 +
*** [[CHC_T00005746001_1]]
 +
*** [[CHC_T00006198001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[UDPREDUCT-RXN]]
 +
** 4 associated gene(s):
 +
*** [[CHC_T00008926001]]
 +
*** [[CHC_T00008926001_1]]
 +
*** [[CHC_T00008864001]]
 +
*** [[CHC_T00008864001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=ARGDECARBOX-RXN ARGDECARBOX-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8850 RXN-8850]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12514 RXN-12514]
+
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12515 RXN-12515]
+
 
== External links  ==
 
== External links  ==
 +
* LIGAND-MAP:
 +
** [http://www.genome.jp/dbget-bin/www_bget?map00240 map00240]
 +
{{#set: common name=pyrimidine deoxyribonucleotides de novo biosynthesis III}}
 +
{{#set: taxonomic range=TAX-5782}}
 +
{{#set: taxonomic range=TAX-10239}}
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2157}}
 
{{#set: taxonomic range=TAX-2157}}
−
{{#set: common name=spermidine biosynthesis III}}
+
{{#set: reaction found=8}}
−
{{#set: reaction found=1}}
+
{{#set: total reaction=9}}
−
{{#set: reaction not found=4}}
+
{{#set: completion rate=89.0}}
−
{{#set: completion rate=25.0}}
+

Latest revision as of 15:37, 9 January 2019

Pathway PWY-6545

Reaction(s) found

8 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links





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