Difference between revisions of "RXN66-311"

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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7820 PWY-7820] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-311 RXN66-311] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** teichuronic acid biosynthesis (B. subtilis 168)
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** 4α-hydroxymethyl-4β-methyl-5α-cholesta-8,24-dien-3β-ol dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[UGD-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-4575]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[CPD-4576]][c] '''+''' 2 [[WATER]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14571 RXN-14571]
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** 1 H+[c] '''+''' 1 NAD(P)H[c] '''+''' 1 oxygen[c] '''+''' 1 4α-hydroxymethyl-4β-methyl-5α-cholesta-8,24-dien-3β-ol[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 4α-formyl-4β-methyl-5α-cholesta-8,24-dien-3β-ol[c] '''+''' 2 H2O[c]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18063 RXN-18063]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18064 RXN-18064]
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== Genes associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18065 RXN-18065]
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18066 RXN-18066]
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* Gene: [[CHC_T00010320001_1]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-18067 RXN-18067]
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** Source: [[orthology-galdieria.sulphuraria]]
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* [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN-322 TRANS-RXN-322]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN UDP-N-ACETYLGLUCOSAMINE-4-EPIMERASE-RXN]
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* [[PWY-6074]], zymosterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6074 PWY-6074]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
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** '''16''' reactions found over '''22''' reactions in the full pathway
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* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
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** '''15''' reactions found over '''22''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1239}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=teichuronic acid biosynthesis (B. subtilis 168)}}
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{{#set: common name=4α-hydroxymethyl-4β-methyl-5α-cholesta-8,24-dien-3β-ol dehydrogenase}}
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{{#set: reaction found=1}}
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{{#set: gene associated=CHC_T00010320001_1}}
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{{#set: reaction not found=9}}
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{{#set: in pathway=PWY-6074|PWY66-4|PWY66-341}}
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{{#set: completion rate=11.0}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:57, 9 January 2019

Reaction RXN66-311

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 4α-hydroxymethyl-4β-methyl-5α-cholesta-8,24-dien-3β-ol dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 NAD(P)H[c] + 1 oxygen[c] + 1 4α-hydroxymethyl-4β-methyl-5α-cholesta-8,24-dien-3β-ol[c] => 1 NAD(P)+[c] + 1 4α-formyl-4β-methyl-5α-cholesta-8,24-dien-3β-ol[c] + 2 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6074, zymosterol biosynthesis: PWY-6074
    • 10 reactions found over 12 reactions in the full pathway
  • PWY66-4, cholesterol biosynthesis III (via desmosterol): PWY66-4
    • 16 reactions found over 22 reactions in the full pathway
  • PWY66-341, cholesterol biosynthesis I: PWY66-341
    • 15 reactions found over 22 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN66-311&oldid=21031"