Difference between revisions of "RXN-6384"

From metabolic_network
Jump to: navigation, search
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-6384 RXN-6384] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
+
** LEFT-TO-RIGHT
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
+
 
* common name:
 
* common name:
−
** icosapentaenoate biosynthesis II (6-desaturase, mammals)
+
** 3-hydroxyisobutyryl-CoA hydrolase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.2.4 EC-3.1.2.4]
 
* Synonym(s):
 
* Synonym(s):
−
** eicosapentaenoic acid biosynthesis II
 
−
** eicosapentaenoate biosynthesis II (metazoa)
 
−
** iicosapentaenoic acid biosynthesis II
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''1''' reactions found over '''7''' reactions in the full pathway
+
* With identifiers:
−
* [[LINOLENOYL-RXN]]
+
** 1 [[3-HYDROXY-PROPIONYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-HYDROXY-PROPIONATE]][c]
−
== Reaction(s) not found ==
+
* With common name(s):
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13426 RXN-13426]
+
** 1 3-hydroxypropanoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 coenzyme A[c] '''+''' 1 H+[c] '''+''' 1 3-hydroxypropanoate[c]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13429 RXN-13429]
+
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16019 RXN-16019]
+
== Genes associated with this reaction  ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16020 RXN-16020]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16021 RXN-16021]
+
* Gene: [[CHC_T00008307001]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16022 RXN-16022]
+
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008307001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
== Pathways  ==
 +
* [[PWY-3941]], β-alanine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3941 PWY-3941]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7574]], propanoyl-CoA degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-33208}}
+
* LIGAND-RXN:
−
{{#set: taxonomic range=TAX-4751}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R03158 R03158]
−
{{#set: common name=icosapentaenoate biosynthesis II (6-desaturase, mammals)}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=eicosapentaenoic acid biosynthesis II|eicosapentaenoate biosynthesis II (metazoa)|iicosapentaenoic acid biosynthesis II}}
+
{{#set: common name=3-hydroxyisobutyryl-CoA hydrolase}}
−
{{#set: reaction found=1}}
+
{{#set: ec number=EC-3.1.2.4}}
−
{{#set: reaction not found=7}}
+
{{#set: gene associated=CHC_T00008307001|CHC_T00008307001_1}}
−
{{#set: completion rate=14.0}}
+
{{#set: in pathway=PWY-3941|PWY-7574}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:04, 9 January 2019

Reaction RXN-6384

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-hydroxyisobutyryl-CoA hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3941, β-alanine biosynthesis II: PWY-3941
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7574, propanoyl-CoA degradation II: PWY-7574
    • 2 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-6384&oldid=21220"