Difference between revisions of "RXN-5467"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5467 RXN-5467] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6004 PWY-6004] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5467 RXN-5467] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** glycine betaine biosynthesis V (from glycine)
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** [http://enzyme.expasy.org/EC/2.4.1.259 EC-2.4.1.259]
 
* Synonym(s):
 
* Synonym(s):
** betaine biosynthesis from glycine
 
  
== Reaction(s) found ==
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== Reaction Formula ==
'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
* [[RXN-9679]]
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** 1 [[CPD-171]][c] '''+''' 1 [[CPD-5165]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[DOLICHOLP]][c] '''+''' 1 [[CPD-5166]][c]
* [[RXN-9680]]
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* With common name(s):
== Reaction(s) not found ==
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** 1 a dolichyl β-D-mannosyl phosphate[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 H+[c] '''+''' 1 a dolichyl phosphate[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c]
* [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE-N-METHYLTRANSFERASE-RXN GLYCINE-N-METHYLTRANSFERASE-RXN]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009519001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''15''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2157}}
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* RHEA:
{{#set: common name=glycine betaine biosynthesis V (from glycine)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29534 29534]
{{#set: common name=betaine biosynthesis from glycine}}
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* LIGAND-RXN:
{{#set: reaction found=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06259 R06259]
{{#set: reaction not found=3}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: completion rate=67.0}}
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{{#set: ec number=EC-2.4.1.259}}
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{{#set: gene associated=CHC_T00009519001_1}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:45, 23 May 2018

Reaction RXN-5467

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a dolichyl β-D-mannosyl phosphate[c] + 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] => 1 H+[c] + 1 a dolichyl phosphate[c] + 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links