Difference between revisions of "PSERTRANSAMPYR-RXN"

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(Created page with "Category:Gene == Gene CHC_1140 == * left end position: ** 175157 * transcription direction: ** POSITIVE * right end position: ** 175261 * common name: ** psb30 * centisome...")
 
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_1140 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] ==
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* left end position:
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* direction:
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** 175157
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** REVERSIBLE
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* transcription direction:
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** POSITIVE
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* right end position:
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** 175261
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* common name:
 
* common name:
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** psb30
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** phosphoserine aminotransferase
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* centisome position:
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* ec number:
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** 97.26297   
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** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PSII-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-PHOSPHONOOXY-THREONINE]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 (3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate[c] '''+''' 1 L-glutamate[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 4-phospho-hydroxy-L-threonine[c]
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* [[PWY-101]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009221001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00000094001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00009221001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways ==
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* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=175157}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16573 16573]
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{{#set: right end position=175261}}
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* LIGAND-RXN:
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{{#set: common name=psb30}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
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{{#set: centisome position=97.26297    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=PSII-RXN}}
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{{#set: common name=phosphoserine aminotransferase}}
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{{#set: pathway associated=PWY-101}}
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{{#set: ec number=EC-2.6.1.52}}
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{{#set: gene associated=CHC_T00009221001|CHC_T00000094001_1|CHC_T00009221001_1}}
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{{#set: in pathway=PYRIDOXSYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:33, 9 January 2019

Reaction PSERTRANSAMPYR-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • phosphoserine aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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