Difference between revisions of "RXN-8654"

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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-561 PWY-561] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8654 RXN-8654] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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* common name:
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** superpathway of glyoxylate cycle and fatty acid degradation
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[FUMHYDR-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[LIPOYL-AMP]][c]
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* [[GLYOXYLATE-BYPASS]]
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* With common name(s):
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* [[MALATE-DEH-RXN]]
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** 1 ATP[c] '''+''' 1 H+[c] '''+''' 1 (R)-lipoate[c] '''=>''' 1 diphosphate[c] '''+''' 1 lipoyl-adenylate[c]
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* [[PWY-5136]]
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* [[RXN-14971]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=PEPCARBOXYKIN-RXN PEPCARBOXYKIN-RXN]
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* Gene: [[CHC_T00006203001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-6984]], lipoate salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6984 PWY-6984]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-522]], lipoate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-522 PWY0-522]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* METACYC:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=PWY-561 PWY-561]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12913 12913]
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{{#set: taxonomic range=TAX-33090}}
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* LIGAND-RXN:
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{{#set: common name=superpathway of glyoxylate cycle and fatty acid degradation}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07770 R07770]
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{{#set: reaction found=5}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction not found=8}}
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{{#set: gene associated=CHC_T00006203001_1}}
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{{#set: completion rate=63.0}}
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{{#set: in pathway=PWY-6984|PWY0-522}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:47, 9 January 2019

Reaction RXN-8654

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 H+[c] + 1 (R)-lipoate[c] => 1 diphosphate[c] + 1 lipoyl-adenylate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6984, lipoate salvage II: PWY-6984
    • 2 reactions found over 4 reactions in the full pathway
  • PWY0-522, lipoate salvage I: PWY0-522
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-8654&oldid=22264"