Difference between revisions of "TRNA-CHARGING-PWY"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...") |
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[[Category:Pathway]] | [[Category:Pathway]] | ||
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] == | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] == | ||
| + | * common name: | ||
| + | ** tRNA charging | ||
* taxonomic range: | * taxonomic range: | ||
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759] | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759] | ||
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] | ||
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157] | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157] | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
| Line 17: | Line 17: | ||
*** [[CHC_T00008489001_1]] | *** [[CHC_T00008489001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[ARGININE--TRNA-LIGASE-RXN]] | * [[ARGININE--TRNA-LIGASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 25: | Line 25: | ||
*** [[CHC_T00010186001_1]] | *** [[CHC_T00010186001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[ASPARAGINE--TRNA-LIGASE-RXN]] | * [[ASPARAGINE--TRNA-LIGASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| + | *** [[CHC_T00008942001_1]] | ||
*** [[CHC_T00008849001_1]] | *** [[CHC_T00008849001_1]] | ||
| − | |||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[ASPARTATE--TRNA-LIGASE-RXN]] | * [[ASPARTATE--TRNA-LIGASE-RXN]] | ||
** 7 associated gene(s): | ** 7 associated gene(s): | ||
| Line 45: | Line 45: | ||
*** [[CHC_T00009433001]] | *** [[CHC_T00009433001]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[CYSTEINE--TRNA-LIGASE-RXN]] | * [[CYSTEINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| − | |||
*** [[CHC_T00009398001_1]] | *** [[CHC_T00009398001_1]] | ||
*** [[CHC_T00009398001]] | *** [[CHC_T00009398001]] | ||
| + | *** [[CHC_T00002892001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[GLURS-RXN]] | * [[GLURS-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 62: | Line 62: | ||
*** [[CHC_T00008453001_1]] | *** [[CHC_T00008453001_1]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[orthology-galdieria.sulphuraria]] | *** [[orthology-galdieria.sulphuraria]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[GLUTAMINE--TRNA-LIGASE-RXN]] | * [[GLUTAMINE--TRNA-LIGASE-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[CHC_T00001673001_1]] | *** [[CHC_T00001673001_1]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[orthology-galdieria.sulphuraria]] | *** [[orthology-galdieria.sulphuraria]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[GLYCINE--TRNA-LIGASE-RXN]] | * [[GLYCINE--TRNA-LIGASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 75: | Line 75: | ||
*** [[CHC_T00007645001_1]] | *** [[CHC_T00007645001_1]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[orthology-galdieria.sulphuraria]] | *** [[orthology-galdieria.sulphuraria]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[HISTIDINE--TRNA-LIGASE-RXN]] | * [[HISTIDINE--TRNA-LIGASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 82: | Line 82: | ||
*** [[CHC_T00004806001_1]] | *** [[CHC_T00004806001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[ISOLEUCINE--TRNA-LIGASE-RXN]] | * [[ISOLEUCINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 91: | Line 91: | ||
*** [[CHC_T00005914001_1]] | *** [[CHC_T00005914001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[LEUCINE--TRNA-LIGASE-RXN]] | * [[LEUCINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 100: | Line 100: | ||
*** [[CHC_T00009574001]] | *** [[CHC_T00009574001]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[LYSINE--TRNA-LIGASE-RXN]] | * [[LYSINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 109: | Line 109: | ||
*** [[CHC_T00008735001_1]] | *** [[CHC_T00008735001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[METHIONINE--TRNA-LIGASE-RXN]] | * [[METHIONINE--TRNA-LIGASE-RXN]] | ||
** 4 associated gene(s): | ** 4 associated gene(s): | ||
| Line 119: | Line 119: | ||
*** [[CHC_T00009091001_1]] | *** [[CHC_T00009091001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[PHENYLALANINE--TRNA-LIGASE-RXN]] | * [[PHENYLALANINE--TRNA-LIGASE-RXN]] | ||
** 6 associated gene(s): | ** 6 associated gene(s): | ||
| − | |||
*** [[CHC_T00001598001_1]] | *** [[CHC_T00001598001_1]] | ||
*** [[CHC_T00002604001_1]] | *** [[CHC_T00002604001_1]] | ||
| Line 130: | Line 129: | ||
*** [[CHC_T00009560001_1]] | *** [[CHC_T00009560001_1]] | ||
*** [[CHC_T00009560001]] | *** [[CHC_T00009560001]] | ||
| + | *** [[CHC_T00003422001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[PROLINE--TRNA-LIGASE-RXN]] | * [[PROLINE--TRNA-LIGASE-RXN]] | ||
** 4 associated gene(s): | ** 4 associated gene(s): | ||
| Line 141: | Line 141: | ||
*** [[CHC_T00009364001]] | *** [[CHC_T00009364001]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[RXN-16165]] | * [[RXN-16165]] | ||
** 4 associated gene(s): | ** 4 associated gene(s): | ||
| Line 151: | Line 151: | ||
*** [[CHC_T00009091001]] | *** [[CHC_T00009091001]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[SERINE--TRNA-LIGASE-RXN]] | * [[SERINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 160: | Line 160: | ||
*** [[CHC_T00009366001_1]] | *** [[CHC_T00009366001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[THREONINE--TRNA-LIGASE-RXN]] | * [[THREONINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 169: | Line 169: | ||
*** [[CHC_T00008771001]] | *** [[CHC_T00008771001]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[TRYPTOPHAN--TRNA-LIGASE-RXN]] | * [[TRYPTOPHAN--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 178: | Line 178: | ||
*** [[CHC_T00010058001]] | *** [[CHC_T00010058001]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[TYROSINE--TRNA-LIGASE-RXN]] | * [[TYROSINE--TRNA-LIGASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| Line 187: | Line 187: | ||
*** [[CHC_T00009345001_1]] | *** [[CHC_T00009345001_1]] | ||
** 3 reconstruction source(s) associated: | ** 3 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[annotation-original_genome]] | *** [[annotation-original_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[VALINE--TRNA-LIGASE-RXN]] | * [[VALINE--TRNA-LIGASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 195: | Line 195: | ||
*** [[CHC_T00001234001_1]] | *** [[CHC_T00001234001_1]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[orthology-galdieria.sulphuraria]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
== Reaction(s) not found == | == Reaction(s) not found == | ||
== External links == | == External links == | ||
* ECOCYC: | * ECOCYC: | ||
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | ** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | ||
| + | {{#set: common name=tRNA charging}} | ||
{{#set: taxonomic range=TAX-2759}} | {{#set: taxonomic range=TAX-2759}} | ||
{{#set: taxonomic range=TAX-2}} | {{#set: taxonomic range=TAX-2}} | ||
{{#set: taxonomic range=TAX-2157}} | {{#set: taxonomic range=TAX-2157}} | ||
| − | |||
{{#set: reaction found=21}} | {{#set: reaction found=21}} | ||
{{#set: total reaction=21}} | {{#set: total reaction=21}} | ||
{{#set: completion rate=100.0}} | {{#set: completion rate=100.0}} | ||
Latest revision as of 15:02, 9 January 2019
Pathway TRNA-CHARGING-PWY
Reaction(s) found
21 reactions found over 21 reactions in the full pathway
- ALANINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- ARGININE--TRNA-LIGASE-RXN
- 2 associated gene(s):
- 3 reconstruction source(s) associated:
- ASPARAGINE--TRNA-LIGASE-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- ASPARTATE--TRNA-LIGASE-RXN
- 7 associated gene(s):
- 3 reconstruction source(s) associated:
- CYSTEINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- GLURS-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- GLUTAMINE--TRNA-LIGASE-RXN
- 1 associated gene(s):
- 2 reconstruction source(s) associated:
- GLYCINE--TRNA-LIGASE-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- HISTIDINE--TRNA-LIGASE-RXN
- 2 associated gene(s):
- 3 reconstruction source(s) associated:
- ISOLEUCINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- LEUCINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- LYSINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- METHIONINE--TRNA-LIGASE-RXN
- 4 associated gene(s):
- 3 reconstruction source(s) associated:
- PHENYLALANINE--TRNA-LIGASE-RXN
- 6 associated gene(s):
- 3 reconstruction source(s) associated:
- PROLINE--TRNA-LIGASE-RXN
- 4 associated gene(s):
- 3 reconstruction source(s) associated:
- RXN-16165
- 4 associated gene(s):
- 3 reconstruction source(s) associated:
- SERINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- THREONINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- TRYPTOPHAN--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- TYROSINE--TRNA-LIGASE-RXN
- 3 associated gene(s):
- 3 reconstruction source(s) associated:
- VALINE--TRNA-LIGASE-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
Reaction(s) not found
External links
- ECOCYC:
