Difference between revisions of "RXN-13202"

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(Created page with "Category:Gene == Gene CHC_665 == * left end position: ** 93764 * transcription direction: ** NEGATIVE * right end position: ** 94189 * common name: ** psaD * centisome pos...")
 
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_665 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13202 RXN-13202] ==
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* left end position:
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* direction:
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** 93764
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** LEFT-TO-RIGHT
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* transcription direction:
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** NEGATIVE
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* right end position:
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** 94189
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* common name:
 
* common name:
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** psaD
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** carbamoyl phosphate synthase small subunit
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* centisome position:
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* ec number:
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** 52.06624   
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** [http://enzyme.expasy.org/EC/6.3.4.16 EC-6.3.4.16]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-15479]]
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* With identifiers:
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** original_genome
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** 1 [[AMMONIUM]][c] '''+''' 1 [[HCO3]][c] '''+''' 2 [[ATP]][c] '''=>''' 2 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 ammonium[c] '''+''' 1 hydrogencarbonate[c] '''+''' 2 ATP[c] '''=>''' 2 ADP[c] '''+''' 1 carbamoyl phosphate[c] '''+''' 2 H+[c] '''+''' 1 phosphate[c]
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* [[PWY-101]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008596001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010056001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_70]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=93764}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10624 10624]
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{{#set: right end position=94189}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18030 18030]
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{{#set: common name=psaD}}
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* UNIPROT:
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{{#set: centisome position=52.06624    }}
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** [http://www.uniprot.org/uniprot/O15829 O15829]
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{{#set: reaction associated=RXN-15479}}
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** [http://www.uniprot.org/uniprot/O15830 O15830]
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{{#set: pathway associated=PWY-101}}
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** [http://www.uniprot.org/uniprot/P07756 P07756]
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** [http://www.uniprot.org/uniprot/P31327 P31327]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00149 R00149]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=carbamoyl phosphate synthase small subunit}}
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{{#set: ec number=EC-6.3.4.16}}
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{{#set: gene associated=CHC_T00008596001_1|CHC_T00010056001_1|CHC_70}}
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{{#set: in pathway=PWY-4984}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:36, 9 January 2019

Reaction RXN-13202

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • carbamoyl phosphate synthase small subunit
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ammonium[c] + 1 hydrogencarbonate[c] + 2 ATP[c] => 2 ADP[c] + 1 carbamoyl phosphate[c] + 2 H+[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4984, urea cycle: PWY-4984
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-13202&oldid=20546"