Difference between revisions of "RXN-16389"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16389 RXN-16389] == * direction: ** LEFT-TO-RIGHT * common name: ** long-chain-fatty-acid-CoA l...") |
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*** Assignment: AUTOMATED-NAME-MATCH | *** Assignment: AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733] | * [[PWY-6733]], sporopollenin precursors biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733] | ||
** '''5''' reactions found over '''18''' reactions in the full pathway | ** '''5''' reactions found over '''18''' reactions in the full pathway | ||
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121] | * [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121] | ||
** '''8''' reactions found over '''19''' reactions in the full pathway | ** '''8''' reactions found over '''19''' reactions in the full pathway | ||
| + | * [[PWY-321]], cutin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-321 PWY-321] | ||
| + | ** '''2''' reactions found over '''16''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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{{#set: ec number=EC-6.2.1.3}} | {{#set: ec number=EC-6.2.1.3}} | ||
{{#set: gene associated=CHC_T00008500001_1|CHC_T00009428001|CHC_T00008811001_1|CHC_T00009428001_1|CHC_T00008160001_1|CHC_T00008811001}} | {{#set: gene associated=CHC_T00008500001_1|CHC_T00009428001|CHC_T00008811001_1|CHC_T00009428001_1|CHC_T00008160001_1|CHC_T00008811001}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-6733|PWY-1121|PWY-321}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:39, 9 January 2019
Contents
Reaction RXN-16389
- direction:
- LEFT-TO-RIGHT
- common name:
- long-chain-fatty-acid-CoA ligase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 coenzyme A[c] + 1 16-hydroxypalmitate[c] + 1 ATP[c] => 1 16-hydroxypalmitoyl-CoA[c] + 1 diphosphate[c] + 1 AMP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008500001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009428001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008811001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00009428001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008160001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00008811001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
Pathways
- PWY-6733, sporopollenin precursors biosynthesis: PWY-6733
- 5 reactions found over 18 reactions in the full pathway
- PWY-1121, suberin monomers biosynthesis: PWY-1121
- 8 reactions found over 19 reactions in the full pathway
- PWY-321, cutin biosynthesis: PWY-321
- 2 reactions found over 16 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
