Difference between revisions of "RXN0-2381"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2381 RXN0-2381] == * direction: ** REVERSIBLE * common name: ** tryptophan synthase alpha chai...") |
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== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
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** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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{{#set: in pathway=TRPSYN-PWY|PWY-6949}} | {{#set: in pathway=TRPSYN-PWY|PWY-6949}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:41, 9 January 2019
Contents
Reaction RXN0-2381
- direction:
- REVERSIBLE
- common name:
- tryptophan synthase alpha chain
- Tryptophan synthase subunit beta
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 INDOLE-3-GLYCEROL-P[c] <=> 1 GAP[c] + 1 INDOLE[c]
- With common name(s):
- 1 (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate[c] <=> 1 D-glyceraldehyde 3-phosphate[c] + 1 indole[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009102001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008842001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008746001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_1120
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008705001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008401001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00007475001_1
- Source: orthology-ectocarpus_siliculosus
Pathways
- TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
- PWY-6949, DIBOA-glucoside biosynthesis: PWY-6949
- 1 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
