Difference between revisions of "GUANOSINE-DIPHOSPHATASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7716 RXN-7716] == * direction: ** REVERSIBLE * common name: ** dihydrolipoamide dehydrogenase *...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7716 RXN-7716] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GUANOSINE-DIPHOSPHATASE-RXN GUANOSINE-DIPHOSPHATASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** dihydrolipoamide dehydrogenase
+
−
** lipoamide dehydrogenase
+
−
** 2-oxoglutarate dehydrogenase, E1 component
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4]
+
** [http://enzyme.expasy.org/EC/3.6.1.42 EC-3.6.1.42]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Oxo-glutarate-dehydrogenase-DH-lipoyl]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c]
+
** 1 [[GDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[GMP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 NAD+[c] '''<=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c]
+
** 1 GDP[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 GMP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00010287001]]
+
* Gene: [[CHC_T00003677001_1]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
***AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00001236001_1]]
−
* [[CHC_T00008312001]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-arabidopsis_thaliana]]
−
* [[CHC_T00008441001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008441001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008312001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00010287001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-arabidopsis_thaliana]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=dihydrolipoamide dehydrogenase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22156 22156]
−
{{#set: common name=lipoamide dehydrogenase}}
+
* UNIPROT:
−
{{#set: common name=2-oxoglutarate dehydrogenase, E1 component}}
+
** [http://www.uniprot.org/uniprot/P32621 P32621]
−
{{#set: ec number=EC-1.8.1.4}}
+
* LIGAND-RXN:
−
{{#set: gene associated=CHC_T00010287001|CHC_T00008312001|CHC_T00008441001_1|CHC_T00008441001|CHC_T00008312001_1|CHC_T00010287001_1}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00328 R00328]
−
{{#set: in pathway=PWY-5084}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-3.6.1.42}}
 +
{{#set: gene associated=CHC_T00003677001_1|CHC_T00001236001_1}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 16:38, 9 January 2019

Reaction GUANOSINE-DIPHOSPHATASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP[c] + 1 H2O[c] => 1 phosphate[c] + 1 GMP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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