Difference between revisions of "PYRUVDEH-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEH-RXN PYRUVDEH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate dehydrogenas...") |
|||
| Line 43: | Line 43: | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384] | * [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384] | ||
** '''5''' reactions found over '''12''' reactions in the full pathway | ** '''5''' reactions found over '''12''' reactions in the full pathway | ||
| − | |||
| − | |||
* [[PWY-5537]], pyruvate fermentation to acetate V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5537 PWY-5537] | * [[PWY-5537]], pyruvate fermentation to acetate V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5537 PWY-5537] | ||
** '''2''' reactions found over '''4''' reactions in the full pathway | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]], superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-TCA-GLYOX-BYPASS GLYCOLYSIS-TCA-GLYOX-BYPASS] | * [[GLYCOLYSIS-TCA-GLYOX-BYPASS]], superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-TCA-GLYOX-BYPASS GLYCOLYSIS-TCA-GLYOX-BYPASS] | ||
** '''3''' reactions found over '''5''' reactions in the full pathway | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7218 PWY-7218] | ||
| + | ** '''7''' reactions found over '''10''' reactions in the full pathway | ||
* [[PWY-5482]], pyruvate fermentation to acetate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5482 PWY-5482] | * [[PWY-5482]], pyruvate fermentation to acetate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5482 PWY-5482] | ||
** '''1''' reactions found over '''3''' reactions in the full pathway | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6886 PWY-6886] | ||
| + | ** '''8''' reactions found over '''11''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 73: | Line 73: | ||
{{#set: ec number=EC-1.2.1}} | {{#set: ec number=EC-1.2.1}} | ||
{{#set: gene associated=CHC_T00010287001_1|CHC_T00008732001_1|CHC_T00008442001_1|CHC_T00008441001_1|CHC_T00008732001|CHC_T00007488001_1|CHC_T00007380001_1}} | {{#set: gene associated=CHC_T00010287001_1|CHC_T00008732001_1|CHC_T00008442001_1|CHC_T00008441001_1|CHC_T00008732001|CHC_T00007488001_1|CHC_T00007380001_1}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY-7384|PWY-5537|GLYCOLYSIS-TCA-GLYOX-BYPASS|PWY-7218|PWY-5482|PWY-6886}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:59, 9 January 2019
Contents
Reaction PYRUVDEH-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 NAD[c] + 1 PYRUVATE[c] + 1 CO-A[c] => 1 NADH[c] + 1 ACETYL-COA[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 NAD+[c] + 1 pyruvate[c] + 1 coenzyme A[c] => 1 NADH[c] + 1 acetyl-CoA[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00010287001_1
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00008732001_1
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00008442001_1
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00008441001_1
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00008732001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00007488001_1
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00007380001_1
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
Pathways
- PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial): PWY-7384
- 5 reactions found over 12 reactions in the full pathway
- PWY-5537, pyruvate fermentation to acetate V: PWY-5537
- 2 reactions found over 4 reactions in the full pathway
- GLYCOLYSIS-TCA-GLYOX-BYPASS, superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass: GLYCOLYSIS-TCA-GLYOX-BYPASS
- 3 reactions found over 5 reactions in the full pathway
- PWY-7218, photosynthetic 3-hydroxybutanoate biosynthesis (engineered): PWY-7218
- 7 reactions found over 10 reactions in the full pathway
- PWY-5482, pyruvate fermentation to acetate II: PWY-5482
- 1 reactions found over 3 reactions in the full pathway
- PWY-6886, 1-butanol autotrophic biosynthesis (engineered): PWY-6886
- 8 reactions found over 11 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
