Difference between revisions of "PWY-3821"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDYLPROLYL-ISOMERASE-RXN PEPTIDYLPROLYL-ISOMERASE-RXN] == * direction: ** REVERSIBLE * common n...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PEPTIDYLPROLYL-ISOMERASE-RXN PEPTIDYLPROLYL-ISOMERASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821] ==
−
* direction:
+
−
** REVERSIBLE
+
 
* common name:
 
* common name:
−
** Peptidyl-prolyl cis-trans isomerase
+
** D-galactose degradation III
−
** peptidyl-prolyl cis-trans isomerase
+
* taxonomic range:
−
* ec number:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
−
** [http://enzyme.expasy.org/EC/5.2.1.8 EC-5.2.1.8]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** UDP-D-galatose biosynthesis (from D-galactose)
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''3''' reactions in the full pathway
−
** 1 [[CPD-8624]][c] '''<=>''' 1 [[CPD-8625]][c]
+
* [[GALACTOKIN-RXN]]
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* With common name(s):
+
** 3 associated gene(s):
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** 1 a [protein]-L-proline (&omega; = 180)[c] '''<=>''' 1 a [protein]-L-proline (&omega; = 0)[c]
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*** [[CHC_T00007304001_1]]
−
 
+
*** [[CHC_T00006831001_1]]
−
== Genes associated with this reaction  ==
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*** [[CHC_T00006828001_1]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 3 reconstruction source(s) associated:
−
* [[CHC_T00009116001_1]]
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*** [[orthology-galdieria.sulphuraria]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
−
* [[CHC_T00007696001_1]]
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*** [[orthology-ectocarpus_siliculosus]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[UDPGLUCEPIM-RXN]]
−
* [[CHC_T00008726001]]
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** 5 associated gene(s):
−
** ORIGINAL_GENOME
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*** [[CHC_T00007304001_1]]
−
***AUTOMATED-NAME-MATCH
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*** [[CHC_T00006828001_1]]
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* [[CHC_T00008420001]]
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*** [[CHC_T00009498001]]
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** ORIGINAL_GENOME
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*** [[CHC_T00009498001_1]]
−
***AUTOMATED-NAME-MATCH
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*** [[CHC_T00006831001_1]]
−
* [[CHC_T00008963001_1]]
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** 4 reconstruction source(s) associated:
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[CHC_T00000384001_1]]
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*** [[annotation-original_genome]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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* [[CHC_T00001971001_1]]
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*** [[orthology-ectocarpus_siliculosus]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[UTPHEXPURIDYLYLTRANS-RXN]]
−
* [[CHC_T00010100001]]
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** 1 associated gene(s):
−
** ORIGINAL_GENOME
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*** [[CHC_T00009281001]]
−
***AUTOMATED-NAME-MATCH
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** 1 reconstruction source(s) associated:
−
* [[CHC_T00006996001_1]]
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*** [[annotation-original_genome]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
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== Reaction(s) not found ==
−
* [[CHC_T00009539001]]
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−
** ORIGINAL_GENOME
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−
***AUTOMATED-NAME-MATCH
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−
* [[CHC_T00006404001_1]]
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−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00003429001_1]]
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−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008322001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00002787001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00006888001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00009552001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009116001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008963001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00010100001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00007310001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00003821001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00007958001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008599001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00005215001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
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−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
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* ARACYC:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04273 R04273]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3821 PWY-3821]
−
* UNIPROT:
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{{#set: common name=D-galactose degradation III}}
−
** [http://www.uniprot.org/uniprot/P20081 P20081]
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{{#set: taxonomic range=TAX-3193}}
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** [http://www.uniprot.org/uniprot/P62942 P62942]
+
{{#set: common name=UDP-D-galatose biosynthesis (from D-galactose)}}
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** [http://www.uniprot.org/uniprot/P30412 P30412]
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{{#set: reaction found=3}}
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** [http://www.uniprot.org/uniprot/P24367 P24367]
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P30405 P30405]
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{{#set: completion rate=100.0}}
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** [http://www.uniprot.org/uniprot/P28725 P28725]
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−
** [http://www.uniprot.org/uniprot/P14088 P14088]
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−
** [http://www.uniprot.org/uniprot/Q08752 Q08752]
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−
** [http://www.uniprot.org/uniprot/Q26994 Q26994]
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−
** [http://www.uniprot.org/uniprot/P45877 P45877]
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−
** [http://www.uniprot.org/uniprot/Q9DCY1 Q9DCY1]
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−
** [http://www.uniprot.org/uniprot/P18203 P18203]
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−
** [http://www.uniprot.org/uniprot/O25982 O25982]
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−
** [http://www.uniprot.org/uniprot/O66105 O66105]
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−
** [http://www.uniprot.org/uniprot/Q9ZL49 Q9ZL49]
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−
** [http://www.uniprot.org/uniprot/P25007 P25007]
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−
** [http://www.uniprot.org/uniprot/Q9UDK1 Q9UDK1]
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−
** [http://www.uniprot.org/uniprot/P34791 P34791]
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−
** [http://www.uniprot.org/uniprot/Q9ZCB7 Q9ZCB7]
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−
** [http://www.uniprot.org/uniprot/P44837 P44837]
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−
** [http://www.uniprot.org/uniprot/P47480 P47480]
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−
** [http://www.uniprot.org/uniprot/P56420 P56420]
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−
** [http://www.uniprot.org/uniprot/P62935 P62935]
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−
** [http://www.uniprot.org/uniprot/P14832 P14832]
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−
** [http://www.uniprot.org/uniprot/P25334 P25334]
+
−
** [http://www.uniprot.org/uniprot/P22011 P22011]
+
−
** [http://www.uniprot.org/uniprot/P0AFL3 P0AFL3]
+
−
** [http://www.uniprot.org/uniprot/P23869 P23869]
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−
** [http://www.uniprot.org/uniprot/P62937 P62937]
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−
** [http://www.uniprot.org/uniprot/P23284 P23284]
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−
** [http://www.uniprot.org/uniprot/P17742 P17742]
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−
** [http://www.uniprot.org/uniprot/P10255 P10255]
+
−
** [http://www.uniprot.org/uniprot/P62936 P62936]
+
−
** [http://www.uniprot.org/uniprot/P24525 P24525]
+
−
** [http://www.uniprot.org/uniprot/P10111 P10111]
+
−
** [http://www.uniprot.org/uniprot/P21568 P21568]
+
−
** [http://www.uniprot.org/uniprot/P29820 P29820]
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−
** [http://www.uniprot.org/uniprot/P21569 P21569]
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−
** [http://www.uniprot.org/uniprot/P18253 P18253]
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−
** [http://www.uniprot.org/uniprot/P15425 P15425]
+
−
** [http://www.uniprot.org/uniprot/P44499 P44499]
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−
** [http://www.uniprot.org/uniprot/P44830 P44830]
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−
** [http://www.uniprot.org/uniprot/P0A850 P0A850]
+
−
** [http://www.uniprot.org/uniprot/Q9ZJH5 Q9ZJH5]
+
−
** [http://www.uniprot.org/uniprot/P0ABZ6 P0ABZ6]
+
−
** [http://www.uniprot.org/uniprot/Q9RXR9 Q9RXR9]
+
−
** [http://www.uniprot.org/uniprot/Q9PNC4 Q9PNC4]
+
−
** [http://www.uniprot.org/uniprot/P56989 P56989]
+
−
** [http://www.uniprot.org/uniprot/P80698 P80698]
+
−
** [http://www.uniprot.org/uniprot/Q9RRF0 Q9RRF0]
+
−
** [http://www.uniprot.org/uniprot/Q9JQS5 Q9JQS5]
+
−
** [http://www.uniprot.org/uniprot/Q57726 Q57726]
+
−
** [http://www.uniprot.org/uniprot/P65762 P65762]
+
−
** [http://www.uniprot.org/uniprot/O27393 O27393]
+
−
** [http://www.uniprot.org/uniprot/Q9JZ74 Q9JZ74]
+
−
** [http://www.uniprot.org/uniprot/Q46108 Q46108]
+
−
** [http://www.uniprot.org/uniprot/Q9JU68 Q9JU68]
+
−
** [http://www.uniprot.org/uniprot/Q9JUB5 Q9JUB5]
+
−
** [http://www.uniprot.org/uniprot/P42458 P42458]
+
−
** [http://www.uniprot.org/uniprot/P68106 P68106]
+
−
** [http://www.uniprot.org/uniprot/Q9QUR7 Q9QUR7]
+
−
** [http://www.uniprot.org/uniprot/P0AEM0 P0AEM0]
+
−
** [http://www.uniprot.org/uniprot/Q00688 Q00688]
+
−
** [http://www.uniprot.org/uniprot/Q7M511 Q7M511]
+
−
** [http://www.uniprot.org/uniprot/P30404 P30404]
+
−
** [http://www.uniprot.org/uniprot/Q7M541 Q7M541]
+
−
** [http://www.uniprot.org/uniprot/P23285 P23285]
+
−
** [http://www.uniprot.org/uniprot/P35627 P35627]
+
−
** [http://www.uniprot.org/uniprot/P29117 P29117]
+
−
** [http://www.uniprot.org/uniprot/P32472 P32472]
+
−
** [http://www.uniprot.org/uniprot/Q06118 Q06118]
+
−
** [http://www.uniprot.org/uniprot/P25719 P25719]
+
−
** [http://www.uniprot.org/uniprot/P35176 P35176]
+
−
** [http://www.uniprot.org/uniprot/Q40493 Q40493]
+
−
** [http://www.uniprot.org/uniprot/P35137 P35137]
+
−
** [http://www.uniprot.org/uniprot/Q53919 Q53919]
+
−
** [http://www.uniprot.org/uniprot/Q40673 Q40673]
+
−
** [http://www.uniprot.org/uniprot/Q40672 Q40672]
+
−
** [http://www.uniprot.org/uniprot/P38911 P38911]
+
−
** [http://www.uniprot.org/uniprot/P0A9L5 P0A9L5]
+
−
** [http://www.uniprot.org/uniprot/Q48822 Q48822]
+
−
** [http://www.uniprot.org/uniprot/Q42406 Q42406]
+
−
** [http://www.uniprot.org/uniprot/P42693 P42693]
+
−
** [http://www.uniprot.org/uniprot/Q99008 Q99008]
+
−
** [http://www.uniprot.org/uniprot/Q8IIK8 Q8IIK8]
+
−
** [http://www.uniprot.org/uniprot/Q27745 Q27745]
+
−
** [http://www.uniprot.org/uniprot/Q41119 Q41119]
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** [http://www.uniprot.org/uniprot/Q43207 Q43207]
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** [http://www.uniprot.org/uniprot/Q06205 Q06205]
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** [http://www.uniprot.org/uniprot/Q8XCI0 Q8XCI0]
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−
** [http://www.uniprot.org/uniprot/P54985 P54985]
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** [http://www.uniprot.org/uniprot/Q9UNP9 Q9UNP9]
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−
** [http://www.uniprot.org/uniprot/Q7M0B2 Q7M0B2]
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−
** [http://www.uniprot.org/uniprot/Q10724 Q10724]
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−
** [http://www.uniprot.org/uniprot/Q38900 Q38900]
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−
** [http://www.uniprot.org/uniprot/Q38936 Q38936]
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−
** [http://www.uniprot.org/uniprot/Q38931 Q38931]
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−
** [http://www.uniprot.org/uniprot/P75454 P75454]
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−
** [http://www.uniprot.org/uniprot/P73789 P73789]
+
−
** [http://www.uniprot.org/uniprot/Q8LDP4 Q8LDP4]
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−
** [http://www.uniprot.org/uniprot/Q25340 Q25340]
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−
** [http://www.uniprot.org/uniprot/O68129 O68129]
+
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** [http://www.uniprot.org/uniprot/O49605 O49605]
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** [http://www.uniprot.org/uniprot/P34790 P34790]
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** [http://www.uniprot.org/uniprot/O04843 O04843]
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** [http://www.uniprot.org/uniprot/O65104 O65104]
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−
** [http://www.uniprot.org/uniprot/Q39613 Q39613]
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−
** [http://www.uniprot.org/uniprot/Q41649 Q41649]
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** [http://www.uniprot.org/uniprot/Q41651 Q41651]
+
−
** [http://www.uniprot.org/uniprot/P52014 P52014]
+
−
** [http://www.uniprot.org/uniprot/P52017 P52017]
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** [http://www.uniprot.org/uniprot/P52018 P52018]
+
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** [http://www.uniprot.org/uniprot/P52013 P52013]
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** [http://www.uniprot.org/uniprot/Q9XXI7 Q9XXI7]
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** [http://www.uniprot.org/uniprot/P52009 P52009]
+
−
** [http://www.uniprot.org/uniprot/P52015 P52015]
+
−
** [http://www.uniprot.org/uniprot/P52011 P52011]
+
−
** [http://www.uniprot.org/uniprot/Q18445 Q18445]
+
−
** [http://www.uniprot.org/uniprot/O54168 O54168]
+
−
** [http://www.uniprot.org/uniprot/Q9XA08 Q9XA08]
+
−
** [http://www.uniprot.org/uniprot/P87051 P87051]
+
−
** [http://www.uniprot.org/uniprot/O74729 O74729]
+
−
** [http://www.uniprot.org/uniprot/O94273 O94273]
+
−
** [http://www.uniprot.org/uniprot/O50586 O50586]
+
−
** [http://www.uniprot.org/uniprot/O93778 O93778]
+
−
** [http://www.uniprot.org/uniprot/Q38867 Q38867]
+
−
** [http://www.uniprot.org/uniprot/Q9LY53 Q9LY53]
+
−
** [http://www.uniprot.org/uniprot/Q96416 Q96416]
+
−
** [http://www.uniprot.org/uniprot/Q96417 Q96417]
+
−
** [http://www.uniprot.org/uniprot/O64456 O64456]
+
−
** [http://www.uniprot.org/uniprot/Q9XF12 Q9XF12]
+
−
** [http://www.uniprot.org/uniprot/Q9SKQ0 Q9SKQ0]
+
−
** [http://www.uniprot.org/uniprot/Q9SP02 Q9SP02]
+
−
** [http://www.uniprot.org/uniprot/P77949 P77949]
+
−
** [http://www.uniprot.org/uniprot/O23727 O23727]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=Peptidyl-prolyl cis-trans isomerase}}
+
−
{{#set: common name=peptidyl-prolyl cis-trans isomerase}}
+
−
{{#set: ec number=EC-5.2.1.8}}
+
−
{{#set: gene associated=CHC_T00009116001_1|CHC_T00007696001_1|CHC_T00008726001|CHC_T00008420001|CHC_T00008963001_1|CHC_T00000384001_1|CHC_T00001971001_1|CHC_T00010100001|CHC_T00006996001_1|CHC_T00009539001|CHC_T00006404001_1|CHC_T00003429001_1|CHC_T00008322001_1|CHC_T00002787001_1|CHC_T00006888001_1|CHC_T00009552001|CHC_T00009116001|CHC_T00008963001|CHC_T00010100001_1|CHC_T00007310001_1|CHC_T00003821001_1|CHC_T00007958001_1|CHC_T00008599001|CHC_T00005215001_1}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 15:33, 9 January 2019

Pathway PWY-3821

  • common name:
    • D-galactose degradation III
  • taxonomic range:
  • Synonym(s):
    • UDP-D-galatose biosynthesis (from D-galactose)

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-3821&oldid=20448"