Difference between revisions of "DCTP-PYROPHOSPHATASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R223-RXN R223-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** octanoyl-CoA ligase ** long-c...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R223-RXN R223-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCTP-PYROPHOSPHATASE-RXN DCTP-PYROPHOSPHATASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** octanoyl-CoA ligase
 
−
** long-chain-fatty-acid-CoA ligase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** [http://enzyme.expasy.org/EC/3.6.1.9 EC-3.6.1.9]
 +
** [http://enzyme.expasy.org/EC/3.6.1.12 EC-3.6.1.12]
 +
** [http://enzyme.expasy.org/EC/3.6.1.65 EC-3.6.1.65]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CPD-195]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[CPD-196]][c]
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** 1 [[DCTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[DCMP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 octanoate[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 octanoyl-CoA[c]
+
** 1 dCTP[c] '''+''' 1 H2O[c] '''=>''' 1 diphosphate[c] '''+''' 1 H+[c] '''+''' 1 dCMP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009428001]]
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* Gene: [[CHC_T00009365001_1]]
−
** ORIGINAL_GENOME
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** Source: [[orthology-galdieria.sulphuraria]]
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***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009428001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008811001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008811001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008160001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008500001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
+
* [[PWY-7206]], pyrimidine deoxyribonucleotides dephosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7206 PWY-7206]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[P221-PWY]], octane oxidation: [http://metacyc.org/META/NEW-IMAGE?object=P221-PWY P221-PWY]
+
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22636 22636]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P39262 P39262]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01668 R01668]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=octanoyl-CoA ligase}}
+
{{#set: ec number=EC-3.6.1.9}}
−
{{#set: common name=long-chain-fatty-acid-CoA ligase}}
+
{{#set: ec number=EC-3.6.1.12}}
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: ec number=EC-3.6.1.65}}
−
{{#set: gene associated=CHC_T00009428001|CHC_T00009428001_1|CHC_T00008811001_1|CHC_T00008811001|CHC_T00008160001_1|CHC_T00008500001_1}}
+
{{#set: gene associated=CHC_T00009365001_1}}
−
{{#set: in pathway=PWY-6920|P221-PWY}}
+
{{#set: in pathway=PWY-7206}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 15:45, 9 January 2019

Reaction DCTP-PYROPHOSPHATASE-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 dCTP[c] + 1 H2O[c] => 1 diphosphate[c] + 1 H+[c] + 1 dCMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7206, pyrimidine deoxyribonucleotides dephosphorylation: PWY-7206
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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