Difference between revisions of "OROTPDECARB-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=OROTPDECARB-RXN OROTPDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...") |
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** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686] | ||
| + | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790] | * [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790] | ||
** '''5''' reactions found over '''6''' reactions in the full pathway | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
* [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791] | * [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791] | ||
| − | |||
| − | |||
** '''5''' reactions found over '''6''' reactions in the full pathway | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11596 11596] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11596 11596] | ||
| − | |||
| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P11172 P11172] | ** [http://www.uniprot.org/uniprot/P11172 P11172] | ||
| Line 78: | Line 76: | ||
** [http://www.uniprot.org/uniprot/Q42942 Q42942] | ** [http://www.uniprot.org/uniprot/Q42942 Q42942] | ||
** [http://www.uniprot.org/uniprot/O74110 O74110] | ** [http://www.uniprot.org/uniprot/O74110 O74110] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00965 R00965] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: ec number=EC-4.1.1.23}} | {{#set: ec number=EC-4.1.1.23}} | ||
{{#set: gene associated=CHC_T00002698001_1}} | {{#set: gene associated=CHC_T00002698001_1}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-5686|PWY-7790|PWY-7791}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| − | {{#set: reconstruction source=orthology- | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 17:22, 9 January 2019
Contents
Reaction OROTPDECARB-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 OROTIDINE-5-PHOSPHATE[c] => 1 CARBON-DIOXIDE[c] + 1 UMP[c]
- With common name(s):
- 1 H+[c] + 1 orotidine 5'-phosphate[c] => 1 CO2[c] + 1 UMP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00002698001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
Pathways
- PWY-5686, UMP biosynthesis I: PWY-5686
- 5 reactions found over 6 reactions in the full pathway
- PWY-7790, UMP biosynthesis II: PWY-7790
- 5 reactions found over 6 reactions in the full pathway
- PWY-7791, UMP biosynthesis III: PWY-7791
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
