Difference between revisions of "PWY-5047"

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(Created page with "Category:Gene == Gene CHC_T00009388001 == * left end position: ** 91120 * transcription direction: ** POSITIVE * right end position: ** 94608 * centisome position: ** 15.5...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Pathway]]
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== Gene CHC_T00009388001 ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5047 PWY-5047] ==
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* left end position:
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* common name:
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** 91120
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** gibberellin biosynthesis IV (Gibberella fujikuroi)
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* transcription direction:
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* taxonomic range:
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** POSITIVE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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* right end position:
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** 94608
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* centisome position:
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** 15.536259   
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* Synonym(s):
 
* Synonym(s):
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** GA3 biosynthesis
  
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== Reactions associated ==
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== Reaction(s) found ==
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* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
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'''6''' reactions found over '''15''' reactions in the full pathway
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** original_genome
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* [[1.14.13.78-RXN]]
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***automated-name-match
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** 9 associated gene(s):
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== Pathways associated ==
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*** [[CHC_T00008663001_1]]
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* [[TRNA-CHARGING-PWY]]
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*** [[CHC_T00010245001_1]]
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*** [[CHC_T00009499001_1]]
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*** [[CHC_T00009062001_1]]
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*** [[CHC_T00008616001_1]]
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*** [[CHC_T00009131001_1]]
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*** [[CHC_T00008813001_1]]
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*** [[CHC_T00008672001_1]]
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*** [[CHC_T00010004001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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* [[1.14.13.79-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00009303001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-5242]]
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** 9 associated gene(s):
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*** [[CHC_T00008813001_1]]
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*** [[CHC_T00008616001_1]]
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*** [[CHC_T00010245001_1]]
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*** [[CHC_T00010004001_1]]
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*** [[CHC_T00009499001_1]]
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*** [[CHC_T00009062001_1]]
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*** [[CHC_T00009131001_1]]
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*** [[CHC_T00008672001_1]]
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*** [[CHC_T00008663001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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* [[RXN-7580]]
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** 9 associated gene(s):
 +
*** [[CHC_T00009131001_1]]
 +
*** [[CHC_T00008813001_1]]
 +
*** [[CHC_T00008672001_1]]
 +
*** [[CHC_T00010245001_1]]
 +
*** [[CHC_T00009062001_1]]
 +
*** [[CHC_T00009499001_1]]
 +
*** [[CHC_T00010004001_1]]
 +
*** [[CHC_T00008663001_1]]
 +
*** [[CHC_T00008616001_1]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-arabidopsis_thaliana]]
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* [[RXN1F-160]]
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** 1 associated gene(s):
 +
*** [[CHC_T00009303001_1]]
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** 1 reconstruction source(s) associated:
 +
*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN1F-161]]
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** 1 associated gene(s):
 +
*** [[CHC_T00009303001_1]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6545 RXN-6545]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6549 RXN-6549]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7617 RXN-7617]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7619 RXN-7619]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7621 RXN-7621]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7624 RXN-7624]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7625 RXN-7625]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7634 RXN-7634]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-166 RXN1F-166]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=91120}}
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{{#set: common name=gibberellin biosynthesis IV (Gibberella fujikuroi)}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: right end position=94608}}
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{{#set: common name=GA3 biosynthesis}}
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{{#set: centisome position=15.536259    }}
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{{#set: reaction found=6}}
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{{#set: reaction associated=ISOLEUCINE--TRNA-LIGASE-RXN}}
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{{#set: total reaction=15}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: completion rate=40.0}}

Latest revision as of 15:41, 9 January 2019

Pathway PWY-5047

  • common name:
    • gibberellin biosynthesis IV (Gibberella fujikuroi)
  • taxonomic range:
  • Synonym(s):
    • GA3 biosynthesis

Reaction(s) found

6 reactions found over 15 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5047&oldid=20661"