Difference between revisions of "CHC T00008766001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9363 RXN-9363] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
(Created page with "Category:Gene == Gene CHC_T00008766001 == * left end position: ** 1826 * transcription direction: ** NEGATIVE * right end position: ** 2494 * centisome position: ** 0.8147...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9363 RXN-9363] ==
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== Gene CHC_T00008766001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1826
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.1.1.163 EC-2.1.1.163]
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** NEGATIVE
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* right end position:
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** 2494
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* centisome position:
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** 0.8147021   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GSHTRAN-RXN]]
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** 1 [[CPD-12121]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-12129]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 demethylmenaquinol-12[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 menaquinol-12[c]
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* Reaction: [[GST-RXN]]
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** Source: [[annotation-original_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-13673]]
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* [[CHC_T00005416001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** Assignment: automated-name-match
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* [[CHC_T00000517001_1]]
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* Reaction: [[RXN-15680]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** Source: [[annotation-original_genome]]
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* [[CHC_T00001339001_1]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways associated ==
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* [[CHC_T00000214001_1]]
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* [[PWY-7112]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[PWY-6842]]
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== Pathways ==
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* [[PWY-4061]]
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* [[PWY-5892]], menaquinol-12 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5892 PWY-5892]
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* [[PWY-7533]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=1826}}
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{{#set: ec number=EC-2.1.1.163}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: gene associated=CHC_T00005416001_1|CHC_T00000517001_1|CHC_T00001339001_1|CHC_T00000214001_1}}
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{{#set: right end position=2494}}
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{{#set: in pathway=PWY-5892}}
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{{#set: centisome position=0.8147021    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 15:20, 23 May 2018

Gene CHC_T00008766001

  • left end position:
    • 1826
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2494
  • centisome position:
    • 0.8147021
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008766001&oldid=14012"