Difference between revisions of "F16ALDOLASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=F16ALDOLASE-RXN F16ALDOLASE-RXN] == * direction: ** REVERSIBLE * common name: ** fructose-1,6-bipho...") |
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** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| + | * [[P185-PWY]], formaldehyde assimilation III (dihydroxyacetone cycle): [http://metacyc.org/META/NEW-IMAGE?object=P185-PWY P185-PWY] | ||
| + | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[GLYCOLYSIS]], glycolysis I (from glucose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS GLYCOLYSIS] | ||
| + | ** '''12''' reactions found over '''12''' reactions in the full pathway | ||
* [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042] | * [[PWY-1042]], glycolysis IV (plant cytosol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1042 PWY-1042] | ||
** '''9''' reactions found over '''10''' reactions in the full pathway | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
| − | * [[ | + | * [[PWY-6142]], gluconeogenesis II (Methanobacterium thermoautotrophicum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6142 PWY-6142] |
| − | ** ''' | + | ** '''10''' reactions found over '''15''' reactions in the full pathway |
| − | * [[ | + | * [[PWY-5484]], glycolysis II (from fructose 6-phosphate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5484 PWY-5484] |
| − | + | ** '''11''' reactions found over '''11''' reactions in the full pathway | |
| − | + | ||
| − | ** ''' | + | |
* [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] | * [[SUCSYN-PWY]], sucrose biosynthesis I (from photosynthesis): [http://metacyc.org/META/NEW-IMAGE?object=SUCSYN-PWY SUCSYN-PWY] | ||
** '''6''' reactions found over '''9''' reactions in the full pathway | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| − | |||
| − | |||
| − | |||
| − | |||
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] | * [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY] | ||
** '''13''' reactions found over '''13''' reactions in the full pathway | ** '''13''' reactions found over '''13''' reactions in the full pathway | ||
| − | * [[PWY- | + | * [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385] |
| − | ** ''' | + | ** '''5''' reactions found over '''9''' reactions in the full pathway |
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY] | * [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY] | ||
** '''10''' reactions found over '''10''' reactions in the full pathway | ** '''10''' reactions found over '''10''' reactions in the full pathway | ||
| − | |||
| − | |||
| − | |||
| − | |||
* [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] | * [[PWY66-399]], gluconeogenesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-399 PWY66-399] | ||
** '''10''' reactions found over '''12''' reactions in the full pathway | ** '''10''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY] | ||
| + | ** '''12''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[P341-PWY]], glycolysis V (Pyrococcus): [http://metacyc.org/META/NEW-IMAGE?object=P341-PWY P341-PWY] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-1861]], formaldehyde assimilation II (RuMP Cycle): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1861 PWY-1861] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 62: | Line 62: | ||
* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14729 14729] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14729 14729] | ||
| − | |||
| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/Q7LZE8 Q7LZE8] | ** [http://www.uniprot.org/uniprot/Q7LZE8 Q7LZE8] | ||
| Line 122: | Line 120: | ||
** [http://www.uniprot.org/uniprot/P36580 P36580] | ** [http://www.uniprot.org/uniprot/P36580 P36580] | ||
** [http://www.uniprot.org/uniprot/P53444 P53444] | ** [http://www.uniprot.org/uniprot/P53444 P53444] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R01068 R01068] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
{{#set: common name=fructose-1,6-biphosphate aldolase}} | {{#set: common name=fructose-1,6-biphosphate aldolase}} | ||
{{#set: ec number=EC-4.1.2.13}} | {{#set: ec number=EC-4.1.2.13}} | ||
{{#set: gene associated=CHC_T00008586001|CHC_T00008586001_1}} | {{#set: gene associated=CHC_T00008586001|CHC_T00008586001_1}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=P185-PWY|GLYCOLYSIS|PWY-1042|PWY-6142|PWY-5484|SUCSYN-PWY|CALVIN-PWY|PWY-7385|ANAGLYCOLYSIS-PWY|PWY66-399|GLUCONEO-PWY|P341-PWY|PWY-1861}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 17:51, 9 January 2019
Contents
Reaction F16ALDOLASE-RXN
- direction:
- REVERSIBLE
- common name:
- fructose-1,6-biphosphate aldolase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 FRUCTOSE-16-DIPHOSPHATE[c] <=> 1 DIHYDROXY-ACETONE-PHOSPHATE[c] + 1 GAP[c]
- With common name(s):
- 1 fructose 1,6-bisphosphate[c] <=> 1 glycerone phosphate[c] + 1 D-glyceraldehyde 3-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008586001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008586001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
Pathways
- P185-PWY, formaldehyde assimilation III (dihydroxyacetone cycle): P185-PWY
- 11 reactions found over 12 reactions in the full pathway
- GLYCOLYSIS, glycolysis I (from glucose 6-phosphate): GLYCOLYSIS
- 12 reactions found over 12 reactions in the full pathway
- PWY-1042, glycolysis IV (plant cytosol): PWY-1042
- 9 reactions found over 10 reactions in the full pathway
- PWY-6142, gluconeogenesis II (Methanobacterium thermoautotrophicum): PWY-6142
- 10 reactions found over 15 reactions in the full pathway
- PWY-5484, glycolysis II (from fructose 6-phosphate): PWY-5484
- 11 reactions found over 11 reactions in the full pathway
- SUCSYN-PWY, sucrose biosynthesis I (from photosynthesis): SUCSYN-PWY
- 6 reactions found over 9 reactions in the full pathway
- CALVIN-PWY, Calvin-Benson-Bassham cycle: CALVIN-PWY
- 13 reactions found over 13 reactions in the full pathway
- PWY-7385, 1,3-propanediol biosynthesis (engineered): PWY-7385
- 5 reactions found over 9 reactions in the full pathway
- ANAGLYCOLYSIS-PWY, glycolysis III (from glucose): ANAGLYCOLYSIS-PWY
- 10 reactions found over 10 reactions in the full pathway
- PWY66-399, gluconeogenesis III: PWY66-399
- 10 reactions found over 12 reactions in the full pathway
- GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
- 12 reactions found over 13 reactions in the full pathway
- P341-PWY, glycolysis V (Pyrococcus): P341-PWY
- 6 reactions found over 9 reactions in the full pathway
- PWY-1861, formaldehyde assimilation II (RuMP Cycle): PWY-1861
- 7 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- Q7LZE8
- Q7M2K6
- P07764
- Q9URB4
- P14223
- Q07159
- P07752
- P14540
- P07341
- P0AB71
- P04075
- P05062
- P09972
- P05064
- P05063
- P22197
- P00883
- P27995
- P05065
- P00884
- P09117
- P17784
- P29356
- P16096
- P08440
- P44429
- P13243
- O51401
- P47269
- Q9CED4
- Q9JW15
- Q59100
- Q59101
- Q7M4Z5
- Q7M4Z4
- P19537
- Q01516
- Q01517
- Q91384
- P52210
- Q42690
- P53447
- Q7LZE9
- P53818
- P46257
- P46256
- Q42476
- P75089
- O22486
- Q40677
- O65581
- Q9SVJ6
- P93565
- P50923
- O04975
- P36580
- P53444
- LIGAND-RXN:
