Difference between revisions of "GALACTOKIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN] == * direction:...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GALACTOKIN-RXN GALACTOKIN-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.6.1.13 EC-2.6.1.13]
+
** [http://enzyme.expasy.org/EC/2.7.1.6 EC-2.7.1.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[L-ORNITHINE]][c] '''+''' 1 [[2-Oxo-carboxylates]][c] '''<=>''' 1 [[Amino-Acids-20]][c] '''+''' 1 [[L-GLUTAMATE_GAMMA-SEMIALDEHYDE]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[ALPHA-D-GALACTOSE]][c] '''<=>''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-ornithine[c] '''+''' 1 a 2-oxo carboxylate[c] '''<=>''' 1 a proteinogenic amino acid[c] '''+''' 1 L-glutamate-5-semialdehyde[c]
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** 1 ATP[c] '''+''' 1 &alpha;-D-galactose[c] '''<=>''' 1 &alpha;-D-galactose 1-phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00002893001_1]]
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* Gene: [[CHC_T00007304001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00006831001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00006828001_1]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13877 13877]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13553 13553]
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* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R01343 R01343]
+
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P31893 P31893]
+
** [http://www.uniprot.org/uniprot/P09608 P09608]
−
** [http://www.uniprot.org/uniprot/P38021 P38021]
+
** [http://www.uniprot.org/uniprot/Q01415 Q01415]
−
** [http://www.uniprot.org/uniprot/Q9P7L5 Q9P7L5]
+
** [http://www.uniprot.org/uniprot/P22713 P22713]
−
** [http://www.uniprot.org/uniprot/P07991 P07991]
+
** [http://www.uniprot.org/uniprot/P31767 P31767]
−
** [http://www.uniprot.org/uniprot/P04181 P04181]
+
** [http://www.uniprot.org/uniprot/Q8X7P4 Q8X7P4]
−
** [http://www.uniprot.org/uniprot/P29758 P29758]
+
** [http://www.uniprot.org/uniprot/Q9R7D7 Q9R7D7]
−
** [http://www.uniprot.org/uniprot/P04182 P04182]
+
** [http://www.uniprot.org/uniprot/P96993 P96993]
 +
** [http://www.uniprot.org/uniprot/P04385 P04385]
 +
** [http://www.uniprot.org/uniprot/P0A6T3 P0A6T3]
 +
** [http://www.uniprot.org/uniprot/P13227 P13227]
 +
** [http://www.uniprot.org/uniprot/P39574 P39574]
 +
** [http://www.uniprot.org/uniprot/P13045 P13045]
 +
** [http://www.uniprot.org/uniprot/Q9SEE5 Q9SEE5]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01092 R01092]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-2.6.1.13}}
+
{{#set: ec number=EC-2.7.1.6}}
−
{{#set: gene associated=CHC_T00002893001_1}}
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{{#set: gene associated=CHC_T00007304001_1|CHC_T00006831001_1|CHC_T00006828001_1}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-6527|PWY-6317|PWY66-422|PWY-3821}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 

Latest revision as of 15:50, 9 January 2019

Reaction GALACTOKIN-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 α-D-galactose[c] <=> 1 α-D-galactose 1-phosphate[c] + 1 ADP[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6527, stachyose degradation: PWY-6527
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6317, D-galactose degradation I (Leloir pathway): PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-422, D-galactose degradation V (Leloir pathway): PWY66-422
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-3821, D-galactose degradation III: PWY-3821
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GALACTOKIN-RXN&oldid=20876"