Difference between revisions of "PWY-5196"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UGD-RXN UGD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** UDP-glucose dehydrogenase * ec...")
 
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UGD-RXN UGD-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5196 PWY-5196] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** UDP-glucose dehydrogenase
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** factor 430 biosynthesis
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/1.1.1.22 EC-1.1.1.22]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
 
* Synonym(s):
 
* Synonym(s):
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** F430 biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''2''' reactions found over '''7''' reactions in the full pathway
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** 1 [[CPD-12575]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[UDP-GLUCURONATE]][c] '''+''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c]
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* [[RXN-8675]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 UDP-α-D-glucose[c] '''+''' 2 NAD+[c] '''+''' 1 H2O[c] '''=>''' 1 UDP-α-D-glucuronate[c] '''+''' 2 NADH[c] '''+''' 3 H+[c]
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*** [[CHC_T00000927001_1]]
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** 2 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-galdieria.sulphuraria]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-ectocarpus_siliculosus]]
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* [[CHC_T00008869001_1]]
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* [[UROPORIIIMETHYLTRANSA-RXN]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 1 associated gene(s):
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** [[pantograph]]-[[a.taliana]]
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*** [[CHC_T00000927001_1]]
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* [[CHC_T00008869001]]
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** 2 reconstruction source(s) associated:
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** ORIGINAL_GENOME
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*** [[orthology-galdieria.sulphuraria]]
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***AUTOMATED-NAME-MATCH
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*** [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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== Reaction(s) not found ==
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* [[PWY-7820]], teichuronic acid biosynthesis (B. subtilis 168): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7820 PWY-7820]
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* [http://metacyc.org/META/NEW-IMAGE?object=DIMETHUROPORDEHYDROG-RXN DIMETHUROPORDEHYDROG-RXN]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8059 RXN-8059]
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* [[PWY-7346]], UDP-α-D-glucuronate biosynthesis (from UDP-glucose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7346 PWY-7346]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8060 RXN-8060]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8061 RXN-8061]
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== Reconstruction information  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8063 RXN-8063]
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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*** [[a.taliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=factor 430 biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23596 23596]
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{{#set: taxonomic range=TAX-224756}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-183939}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00286 R00286]
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{{#set: taxonomic range=TAX-183925}}
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* UNIPROT:
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{{#set: common name=F430 biosynthesis}}
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** [http://www.uniprot.org/uniprot/Q8NKX0 Q8NKX0]
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{{#set: reaction found=2}}
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** [http://www.uniprot.org/uniprot/Q9PML6 Q9PML6]
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{{#set: total reaction=7}}
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** [http://www.uniprot.org/uniprot/Q58454 Q58454]
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{{#set: completion rate=28.999999999999996}}
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** [http://www.uniprot.org/uniprot/Q47329 Q47329]
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** [http://www.uniprot.org/uniprot/Q96558 Q96558]
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** [http://www.uniprot.org/uniprot/O41091 O41091]
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** [http://www.uniprot.org/uniprot/Q9RMC2 Q9RMC2]
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** [http://www.uniprot.org/uniprot/O54068 O54068]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=UDP-glucose dehydrogenase}}
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{{#set: ec number=EC-1.1.1.22}}
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{{#set: gene associated=CHC_T00008869001_1|CHC_T00008869001}}
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{{#set: in pathway=PWY-7820|PWY-7346}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 15:47, 9 January 2019

Pathway PWY-5196

Reaction(s) found

2 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5196&oldid=20804"