Difference between revisions of "UGD-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4891 TAX-48...")
 
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6871 PWY-6871] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UGD-RXN UGD-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4891 TAX-4891]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** 3-methylbutanol biosynthesis (engineered)
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** UDP-glucose dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.22 EC-1.1.1.22]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''7''' reaction(s) found
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* With identifiers:
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** [[RXN-7800]]
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** 2 [[NAD]][c] '''+''' 1 [[CPD-12575]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[UDP-GLUCURONATE]][c]
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** [[RXN-7693]]
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* With common name(s):
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** [[RXN-7692]]
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** 2 NAD+[c] '''+''' 1 UDP-α-D-glucose[c] '''+''' 1 H2O[c] '''=>''' 2 NADH[c] '''+''' 3 H+[c] '''+''' 1 UDP-α-D-glucuronate[c]
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** [[3-ISOPROPYLMALDEHYDROG-RXN]]
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** [[2-ISOPROPYLMALATESYN-RXN]]
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== Genes associated with this reaction  ==
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** [[3-ISOPROPYLMALISOM-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** [[RXN-8991]]
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* Gene: [[CHC_T00008869001_1]]
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== Reaction(s) not found ==
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** Source: [[orthology-galdieria.sulphuraria]]
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* '''0''' reaction(s) not found
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00008869001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7346]], UDP-α-D-glucuronate biosynthesis (from UDP-glucose): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7346 PWY-7346]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7820]], teichuronic acid biosynthesis (B. subtilis 168): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7820 PWY-7820]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4891}}
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23596 23596]
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{{#set: common name=3-methylbutanol biosynthesis (engineered)}}
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* UNIPROT:
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{{#set: reaction found=7}}
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** [http://www.uniprot.org/uniprot/Q8NKX0 Q8NKX0]
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{{#set: reaction not found=0}}
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** [http://www.uniprot.org/uniprot/Q9PML6 Q9PML6]
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** [http://www.uniprot.org/uniprot/Q58454 Q58454]
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** [http://www.uniprot.org/uniprot/Q47329 Q47329]
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** [http://www.uniprot.org/uniprot/Q96558 Q96558]
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** [http://www.uniprot.org/uniprot/O41091 O41091]
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** [http://www.uniprot.org/uniprot/Q9RMC2 Q9RMC2]
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** [http://www.uniprot.org/uniprot/O54068 O54068]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00286 R00286]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=UDP-glucose dehydrogenase}}
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{{#set: ec number=EC-1.1.1.22}}
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{{#set: gene associated=CHC_T00008869001_1|CHC_T00008869001}}
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{{#set: in pathway=PWY-7346|PWY-7820}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:53, 9 January 2019

Reaction UGD-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • UDP-glucose dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 NAD+[c] + 1 UDP-α-D-glucose[c] + 1 H2O[c] => 2 NADH[c] + 3 H+[c] + 1 UDP-α-D-glucuronate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7346, UDP-α-D-glucuronate biosynthesis (from UDP-glucose): PWY-7346
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7820, teichuronic acid biosynthesis (B. subtilis 168): PWY-7820
    • 1 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=UGD-RXN&oldid=20958"