Difference between revisions of "RXN-9758"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14775 RXN-14775] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase * ec numbe...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14775 RXN-14775] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9758 RXN-9758] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** acyl-CoA oxidase
+
** aldehyde dehydrogenase, (NAD) activity
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
+
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-15668]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-15654]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[CPD-10472]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SS-DIMETHYL-BETA-PROPIOTHETIN]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 4-cis-undecenoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 2-trans, 4-cis-undecadienoyl-CoA[c]
+
** 1 NAD+[c] '''+''' 1 3-dimethylsulfoniopropionaldehyde[c] '''+''' 1 H2O[c] '''=>''' 1 NADH[c] '''+''' 2 H+[c] '''+''' 1 dimethylsulfoniopropanoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00007910001_1]]
+
* Gene: [[CHC_T00008341001]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[annotation-original_genome]]
−
* [[CHC_T00009531001]]
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*** Assignment: AUTOMATED-NAME-MATCH
−
** ORIGINAL_GENOME
+
* Gene: [[CHC_T00008341001_1]]
−
***AUTOMATED-NAME-MATCH
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** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00009531001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008400001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008478001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008935001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009142001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008400001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008935001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7337]], 10-cis-heptadecenoyl-CoA degradation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7337 PWY-7337]
+
* [[PWY-6055]], dimethylsulfoniopropanoate biosynthesis II (Spartina): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6055 PWY-6055]
−
** '''3''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6054]], dimethylsulfoniopropanoate biosynthesis I (Wollastonia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6054 PWY-6054]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
* Category: [[annotation]]
−
** [[pathwaytools]]:
+
** Source: [[annotation-original_genome]]
−
*** [[original_genome]]
+
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=acyl-CoA oxidase}}
+
{{#set: common name=aldehyde dehydrogenase, (NAD) activity}}
−
{{#set: ec number=EC-1.3.3.6}}
+
{{#set: ec number=EC-1.2.1.3}}
−
{{#set: gene associated=CHC_T00007910001_1|CHC_T00009531001|CHC_T00009531001_1|CHC_T00008400001|CHC_T00008478001_1|CHC_T00008935001|CHC_T00009142001|CHC_T00008400001_1|CHC_T00008935001_1}}
+
{{#set: gene associated=CHC_T00008341001|CHC_T00008341001_1}}
−
{{#set: in pathway=PWY-7337}}
+
{{#set: in pathway=PWY-6055|PWY-6054}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 16:57, 9 January 2019

Reaction RXN-9758

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • aldehyde dehydrogenase, (NAD) activity
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6055, dimethylsulfoniopropanoate biosynthesis II (Spartina): PWY-6055
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6054, dimethylsulfoniopropanoate biosynthesis I (Wollastonia): PWY-6054
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-9758&oldid=21053"