Difference between revisions of "RXN-8042"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=MAP-Kinase-L-Phosphothreonine MAP-Kinase-L-Phosphothreonine] == * common name: ** a [mitogen-ac...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=MAP-Kinase-L-Phosphothreonine MAP-Kinase-L-Phosphothreonine] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8042 RXN-8042] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a [mitogen-activated protein kinase] L-threonine phosphate
+
** Carotene isomerase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/5.2.1.13 EC-5.2.1.13]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
== Reaction(s) of unknown directionality ==
+
** 1 [[CPD-7496]][c] '''=>''' 1 [[CPD1F-114]][c]
−
* [[2.7.12.2-RXN]]
+
* With common name(s):
 +
** 1 prolycopene[c] '''=>''' 1 all-trans-lycopene[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00008475001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008475001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
 +
** '''6''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a [mitogen-activated protein kinase] L-threonine phosphate}}
+
* RHEA:
−
{{#set: consumed or produced by=2.7.12.2-RXN}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30974 30974]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R07512 R07512]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Carotene isomerase}}
 +
{{#set: ec number=EC-5.2.1.13}}
 +
{{#set: gene associated=CHC_T00008475001_1|CHC_T00008475001}}
 +
{{#set: in pathway=PWY-6475}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:01, 9 January 2019

Reaction RXN-8042

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Carotene isomerase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 prolycopene[c] => 1 all-trans-lycopene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6475, trans-lycopene biosynthesis II (plants): PWY-6475
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-8042&oldid=21137"