Difference between revisions of "RXN0-1134"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene CHC_T00008729001 == * left end position: ** 180537 * transcription direction: ** NEGATIVE * right end position: ** 182342 * centisome position: ** 77...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene CHC_T00008729001 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] ==
−
* left end position:
+
* direction:
−
** 180537
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** NEGATIVE
+
** pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor
−
* right end position:
+
* ec number:
−
** 182342
+
** [http://enzyme.expasy.org/EC/1.2.4.1 EC-1.2.4.1]
−
* centisome position:
+
−
** 77.74663   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[PROTEIN-KINASE-RXN]]
+
* With identifiers:
−
** original_genome
+
** 1 [[PYRUVATE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c]
−
***automated-name-match
+
* With common name(s):
−
== Pathways associated ==
+
** 1 pyruvate[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00008732001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008732001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008442001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
== Pathways ==
 +
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=180537}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=NEGATIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01699 R01699]
−
{{#set: right end position=182342}}
+
* UNIPROT:
−
{{#set: centisome position=77.74663    }}
+
** [http://www.uniprot.org/uniprot/P06959 P06959]
−
{{#set: reaction associated=PROTEIN-KINASE-RXN}}
+
** [http://www.uniprot.org/uniprot/P26267 P26267]
 +
** [http://www.uniprot.org/uniprot/P35485 P35485]
 +
** [http://www.uniprot.org/uniprot/Q59097 Q59097]
 +
** [http://www.uniprot.org/uniprot/Q9N1X8 Q9N1X8]
 +
** [http://www.uniprot.org/uniprot/P45119 P45119]
 +
** [http://www.uniprot.org/uniprot/P11966 P11966]
 +
** [http://www.uniprot.org/uniprot/P35488 P35488]
 +
** [http://www.uniprot.org/uniprot/P47515 P47515]
 +
** [http://www.uniprot.org/uniprot/P21882 P21882]
 +
** [http://www.uniprot.org/uniprot/P47516 P47516]
 +
** [http://www.uniprot.org/uniprot/P21881 P21881]
 +
** [http://www.uniprot.org/uniprot/P21873 P21873]
 +
** [http://www.uniprot.org/uniprot/P16387 P16387]
 +
** [http://www.uniprot.org/uniprot/P0AFG8 P0AFG8]
 +
** [http://www.uniprot.org/uniprot/P08559 P08559]
 +
** [http://www.uniprot.org/uniprot/P11177 P11177]
 +
** [http://www.uniprot.org/uniprot/P29803 P29803]
 +
** [http://www.uniprot.org/uniprot/P29804 P29804]
 +
** [http://www.uniprot.org/uniprot/P26284 P26284]
 +
** [http://www.uniprot.org/uniprot/Q9JU08 Q9JU08]
 +
** [http://www.uniprot.org/uniprot/Q9CJD6 Q9CJD6]
 +
** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
 +
** [http://www.uniprot.org/uniprot/Q9CJD5 Q9CJD5]
 +
** [http://www.uniprot.org/uniprot/Q09171 Q09171]
 +
** [http://www.uniprot.org/uniprot/P52901 P52901]
 +
** [http://www.uniprot.org/uniprot/P79931 P79931]
 +
** [http://www.uniprot.org/uniprot/P79932 P79932]
 +
** [http://www.uniprot.org/uniprot/Q9D051 Q9D051]
 +
** [http://www.uniprot.org/uniprot/P10801 P10801]
 +
** [http://www.uniprot.org/uniprot/P21874 P21874]
 +
** [http://www.uniprot.org/uniprot/P49432 P49432]
 +
** [http://www.uniprot.org/uniprot/Q59820 Q59820]
 +
** [http://www.uniprot.org/uniprot/P35486 P35486]
 +
** [http://www.uniprot.org/uniprot/P35487 P35487]
 +
** [http://www.uniprot.org/uniprot/Q06437 Q06437]
 +
** [http://www.uniprot.org/uniprot/P32473 P32473]
 +
** [http://www.uniprot.org/uniprot/Q59107 Q59107]
 +
** [http://www.uniprot.org/uniprot/P73405 P73405]
 +
** [http://www.uniprot.org/uniprot/Q49109 Q49109]
 +
** [http://www.uniprot.org/uniprot/O48685 O48685]
 +
** [http://www.uniprot.org/uniprot/P52902 P52902]
 +
** [http://www.uniprot.org/uniprot/P52904 P52904]
 +
** [http://www.uniprot.org/uniprot/P52903 P52903]
 +
** [http://www.uniprot.org/uniprot/O66112 O66112]
 +
** [http://www.uniprot.org/uniprot/Q9Y8I5 Q9Y8I5]
 +
** [http://www.uniprot.org/uniprot/Q9Y8I6 Q9Y8I6]
 +
** [http://www.uniprot.org/uniprot/O69478 O69478]
 +
** [http://www.uniprot.org/uniprot/P10802 P10802]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor}}
 +
{{#set: ec number=EC-1.2.4.1}}
 +
{{#set: gene associated=CHC_T00008732001|CHC_T00008732001_1|CHC_T00008442001_1}}
 +
{{#set: in pathway=PYRUVDEHYD-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:07, 9 January 2019

Reaction RXN0-1134

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN0-1134&oldid=21300"