Difference between revisions of "PWY-6113"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/E...")
 
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6113 PWY-6113] ==
* direction:
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* common name:
** LEFT-TO-RIGHT
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** superpathway of mycolate biosynthesis
* ec number:
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* taxonomic range:
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1762 TAX-1762]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''7''' reactions found over '''12''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[XANTHOSINE]][c] '''+''' 1 [[Pi]][c]
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* [[PWY-4381]]
* With common name(s):
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** 0 associated gene:
** 1 H2O[c] '''+''' 1 XMP[c] '''=>''' 1 xanthosine[c] '''+''' 1 phosphate[c]
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* [[PWY-5971]]
 
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** 0 associated gene:
== Genes associated with this reaction  ==
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* [[PWY-5989]]
Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
* [[CHC_T00000267001_1]]
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* [[PWYG-321]]
** [[pantograph]]-[[a.taliana]]
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** 0 associated gene:
* [[CHC_T00008300001_1]]
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* [[RXN-10059]]
** [[pantograph]]-[[galdieria.sulphuraria]]
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** 2 associated gene(s):
== Pathways  ==
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*** [[CHC_T00009465001_1]]
* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
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*** [[CHC_T00009465001]]
** '''3''' reactions found over '''4''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
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*** [[annotation-original_genome]]
** '''6''' reactions found over '''8''' reactions in the full pathway
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*** [[orthology-ectocarpus_siliculosus]]
== Reconstruction information  ==
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* [[RXN-10060]]
* [[orthology]]:
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** 4 associated gene(s):
** [[pantograph]]:
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*** [[CHC_T00008557001]]
*** [[galdieria.sulphuraria]]
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*** [[CHC_T00008517001_1]]
*** [[a.taliana]]
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*** [[CHC_T00008477001]]
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*** [[CHC_T00008496001]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-10062]]
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** 1 associated gene(s):
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*** [[CHC_T00009325001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10061 RXN-10061]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=superpathway of mycolate biosynthesis}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28530 28530]
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{{#set: taxonomic range=TAX-1762}}
* LIGAND-RXN:
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{{#set: reaction found=7}}
** [http://www.genome.jp/dbget-bin/www_bget?R02719 R02719]
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{{#set: total reaction=12}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=57.99999999999999}}
{{#set: ec number=EC-3.1.3.5}}
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{{#set: gene associated=CHC_T00000267001_1|CHC_T00008300001_1}}
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{{#set: in pathway=PWY-5695|PWY-6596}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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Latest revision as of 16:03, 9 January 2019

Pathway PWY-6113

  • common name:
    • superpathway of mycolate biosynthesis
  • taxonomic range:
  • Synonym(s):

Reaction(s) found

7 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links