Difference between revisions of "RXN-11479"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN1HP7-3 TRANS-RXN1HP7-3] == * direction: ** REVERSIBLE * common name: ** TRANS-RXN1HP7-3 *...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11479 RXN-11479] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase * ec...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11479 RXN-11479] == |
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
* common name: | * common name: | ||
| − | ** | + | ** Beta-ketoacyl synthase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 | + | ** 1 [[PROTON]][c] '''+''' 1 [[Glutaryl-ACP-methyl-esters]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H+[c] '''+''' 1 a glutaryl-[acp] methyl ester[c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a 3-oxo-pimeloyl-[acp] methyl ester[c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[CHC_T00009465001]] |
| − | ** [[ | + | ** Source: [[annotation-original_genome]] |
| − | * | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | ** | + | * Gene: [[CHC_T00009465001_1]] |
| − | + | ** Source: [[orthology-ectocarpus_siliculosus]] | |
| − | + | ||
| − | * [[ | + | |
| − | ** [[ | + | |
== Pathways == | == Pathways == | ||
| + | * [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519] | ||
| + | ** '''7''' reactions found over '''11''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | {{#set: common name= | + | {{#set: common name=Beta-ketoacyl synthase}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-2.3.1.41}} |
| − | {{#set: in pathway=}} | + | {{#set: gene associated=CHC_T00009465001|CHC_T00009465001_1}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: in pathway=PWY-6519}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:35, 23 May 2018
Contents
Reaction RXN-11479
- direction:
- LEFT-TO-RIGHT
- common name:
- Beta-ketoacyl synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 Glutaryl-ACP-methyl-esters[c] + 1 MALONYL-ACP[c] => 1 3-Ketopimeloyl-ACP-methyl-esters[c] + 1 CARBON-DIOXIDE[c] + 1 ACP[c]
- With common name(s):
- 1 H+[c] + 1 a glutaryl-[acp] methyl ester[c] + 1 a malonyl-[acp][c] => 1 a 3-oxo-pimeloyl-[acp] methyl ester[c] + 1 CO2[c] + 1 a holo-[acyl-carrier protein][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009465001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009465001_1
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-6519, 8-amino-7-oxononanoate biosynthesis I: PWY-6519
- 7 reactions found over 11 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
