Difference between revisions of "PWY-6453"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5144 RXN0-5144] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5144 RXN0-5144] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6453 PWY-6453] ==
* direction:
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* common name:
** LEFT-TO-RIGHT
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** stigma estolide biosynthesis
* ec number:
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* taxonomic range:
** [http://enzyme.expasy.org/EC/2.1.1.61 EC-2.1.1.61]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4070 TAX-4070]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''7''' reactions in the full pathway
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[tRNA-Containing-5AminoMe-2-ThioUrdines]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[tRNA-Containing-5MeAminoMe-2-ThioU]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-16117]]
* With common name(s):
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** 2 associated gene(s):
** 1 S-adenosyl-L-methionine[c] '''+''' 1 a 5-aminomethyl-2-thiouridine in tRNA[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 a 5-methylaminomethyl-2-thiouridine in tRNA[c] '''+''' 1 H+[c]
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*** [[CHC_T00008773001]]
 
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*** [[CHC_T00008773001_1]]
== Genes associated with this reaction  ==
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** 3 reconstruction source(s) associated:
Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-galdieria.sulphuraria]]
* [[CHC_T00004341001_1]]
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*** [[annotation-original_genome]]
** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
== Pathways  ==
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* [[RXN-16118]]
== Reconstruction information  ==
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** 7 associated gene(s):
* [[orthology]]:
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*** [[CHC_T00008713001_1]]
** [[pantograph]]:
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*** [[CHC_T00008325001]]
*** [[galdieria.sulphuraria]]
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*** [[CHC_T00008526001]]
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*** [[CHC_T00009396001]]
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*** [[CHC_T00009396001_1]]
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*** [[CHC_T00009195001]]
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*** [[CHC_T00008713001]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-16121]]
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** 1 associated gene(s):
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*** [[CHC_T00009530001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1063 RXN-1063]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16116 RXN-16116]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16119 RXN-16119]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16120 RXN-16120]
 
== External links  ==
 
== External links  ==
* LIGAND-RXN:
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{{#set: common name=stigma estolide biosynthesis}}
** [http://www.genome.jp/dbget-bin/www_bget?R00601 R00601]
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{{#set: taxonomic range=TAX-4070}}
* UNIPROT:
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{{#set: reaction found=3}}
** [http://www.uniprot.org/uniprot/Q9PJ66 Q9PJ66]
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{{#set: total reaction=7}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: completion rate=43.0}}
{{#set: ec number=EC-2.1.1.61}}
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{{#set: gene associated=CHC_T00004341001_1}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 16:07, 9 January 2019

Pathway PWY-6453

  • common name:
    • stigma estolide biosynthesis
  • taxonomic range:
  • Synonym(s):

Reaction(s) found

3 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links