Difference between revisions of "LIPOXYGENASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2145 RXN0-2145] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2145 RXN0-2145] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LIPOXYGENASE-RXN LIPOXYGENASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.3.1.9 EC-1.3.1.9]
+
** [http://enzyme.expasy.org/EC/1.13.11.12 EC-1.13.11.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[Trans-D3-cis-D5-dodecenoyl-ACPs]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Cis-Delta5-dodecenoyl-ACPs]][c]
+
** 1 [[LINOLEIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[13-HYDROPEROXYOCTADECA-911-DIENOATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 a (3E,5Z)-dodeca-3,5-dienoyl-[acp][c] '''=>''' 1 NAD+[c] '''+''' 1 a (5Z)-dodec-5-enoyl-[acp][c]
+
** 1 linoleate[c] '''+''' 1 oxygen[c] '''=>''' 1 (13S)-HPODE[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[CHC_T00009325001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-862]], (5Z)-dodec-5-enoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-862 PWY0-862]
+
* [[PWY-5410]], traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5409]], divinyl ether biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5409 PWY-5409]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22780 22780]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P09439 P09439]
 +
** [http://www.uniprot.org/uniprot/P08170 P08170]
 +
** [http://www.uniprot.org/uniprot/Q06327 Q06327]
 +
** [http://www.uniprot.org/uniprot/P38418 P38418]
 +
** [http://www.uniprot.org/uniprot/Q9S8X5 Q9S8X5]
 +
** [http://www.uniprot.org/uniprot/P09918 P09918]
 +
** [http://www.uniprot.org/uniprot/P14856 P14856]
 +
** [http://www.uniprot.org/uniprot/P24095 P24095]
 +
** [http://www.uniprot.org/uniprot/Q41244 Q41244]
 +
** [http://www.uniprot.org/uniprot/Q41245 Q41245]
 +
** [http://www.uniprot.org/uniprot/Q9S9D8 Q9S9D8]
 +
** [http://www.uniprot.org/uniprot/P27481 P27481]
 +
** [http://www.uniprot.org/uniprot/P27480 P27480]
 +
** [http://www.uniprot.org/uniprot/P29250 P29250]
 +
** [http://www.uniprot.org/uniprot/P37831 P37831]
 +
** [http://www.uniprot.org/uniprot/Q43817 Q43817]
 +
** [http://www.uniprot.org/uniprot/Q43800 Q43800]
 +
** [http://www.uniprot.org/uniprot/Q42710 Q42710]
 +
** [http://www.uniprot.org/uniprot/P29114 P29114]
 +
** [http://www.uniprot.org/uniprot/Q42846 Q42846]
 +
** [http://www.uniprot.org/uniprot/Q42847 Q42847]
 +
** [http://www.uniprot.org/uniprot/P93184 P93184]
 +
** [http://www.uniprot.org/uniprot/P93190 P93190]
 +
** [http://www.uniprot.org/uniprot/Q41520 Q41520]
 +
** [http://www.uniprot.org/uniprot/P38416 P38416]
 +
** [http://www.uniprot.org/uniprot/Q42873 Q42873]
 +
** [http://www.uniprot.org/uniprot/Q43438 Q43438]
 +
** [http://www.uniprot.org/uniprot/Q43440 Q43440]
 +
** [http://www.uniprot.org/uniprot/O24295 O24295]
 +
** [http://www.uniprot.org/uniprot/Q42780 Q42780]
 +
** [http://www.uniprot.org/uniprot/O24470 O24470]
 +
** [http://www.uniprot.org/uniprot/Q43501 Q43501]
 +
** [http://www.uniprot.org/uniprot/Q43446 Q43446]
 +
** [http://www.uniprot.org/uniprot/O49878 O49878]
 +
** [http://www.uniprot.org/uniprot/O49880 O49880]
 +
** [http://www.uniprot.org/uniprot/O24370 O24370]
 +
** [http://www.uniprot.org/uniprot/O24371 O24371]
 +
** [http://www.uniprot.org/uniprot/Q41430 Q41430]
 +
** [http://www.uniprot.org/uniprot/Q96573 Q96573]
 +
** [http://www.uniprot.org/uniprot/Q96574 Q96574]
 +
** [http://www.uniprot.org/uniprot/P38417 P38417]
 +
** [http://www.uniprot.org/uniprot/Q39874 Q39874]
 +
** [http://www.uniprot.org/uniprot/Q39875 Q39875]
 +
** [http://www.uniprot.org/uniprot/Q43191 Q43191]
 +
** [http://www.uniprot.org/uniprot/Q39611 Q39611]
 +
** [http://www.uniprot.org/uniprot/Q42705 Q42705]
 +
** [http://www.uniprot.org/uniprot/P93698 P93698]
 +
** [http://www.uniprot.org/uniprot/O24320 O24320]
 +
** [http://www.uniprot.org/uniprot/O04919 O04919]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03626 R03626]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.3.1.9}}
+
{{#set: ec number=EC-1.13.11.12}}
−
{{#set: gene associated=CHC_T00009325001_1}}
+
{{#set: in pathway=PWY-5410|PWY-5409}}
−
{{#set: in pathway=PWY0-862}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 15:02, 9 January 2019

Reaction LIPOXYGENASE-RXN

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-5410, traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: PWY-5410
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-5409, divinyl ether biosynthesis II: PWY-5409
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




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