Difference between revisions of "PWY-3385"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.119-RXN 2.4.1.119-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.119-RXN 2.4.1.119-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-3385 PWY-3385] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** choline biosynthesis I
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/2.4.99.18 EC-2.4.99.18]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''6''' reactions in the full pathway
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** 1 [[CPD-18076]][c] '''+''' 1 [[Protein-L-Asparagine]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-18077]][c] '''+''' 1 [[CPD-224]][c]
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* [[ETHANOLAMINE-KINASE-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a [protein]-L-asparagine[c] '''=>''' 1 H+[c] '''+''' 1 a [protein]-L-asparagine-[(glucosyl)3(mannosyl)9(N-acetylglucosaminyl)2][c] '''+''' 1 a dolichyl diphosphate[c]
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*** [[CHC_T00008383001]]
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*** [[CHC_T00008383001_1]]
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== Genes associated with this reaction  ==
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** 3 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-galdieria.sulphuraria]]
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* [[CHC_T00010072001_1]]
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*** [[annotation-original_genome]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[CHC_T00001157001_1]]
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== Reaction(s) not found ==
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.103-RXN 2.1.1.103-RXN]
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* [[CHC_T00009034001_1]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5641 RXN-5641]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5642 RXN-5642]
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5643 RXN-5643]
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-5647 RXN-5647]
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** '''12''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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* ARACYC:
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** [http://www.uniprot.org/uniprot/P39656 P39656]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-3385 PWY-3385]
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** [http://www.uniprot.org/uniprot/P48440 P48440]
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{{#set: common name=choline biosynthesis I}}
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** [http://www.uniprot.org/uniprot/P41543 P41543]
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.uniprot.org/uniprot/P80896 P80896]
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P80897 P80897]
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{{#set: total reaction=6}}
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** [http://www.uniprot.org/uniprot/P48439 P48439]
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{{#set: completion rate=17.0}}
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** [http://www.uniprot.org/uniprot/P46964 P46964]
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** [http://www.uniprot.org/uniprot/Q92316 Q92316]
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** [http://www.uniprot.org/uniprot/Q10176 Q10176]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.4.99.18}}
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{{#set: gene associated=CHC_T00010072001_1|CHC_T00001157001_1|CHC_T00009034001_1}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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Latest revision as of 16:09, 9 January 2019

Pathway PWY-3385

  • common name:
    • choline biosynthesis I
  • taxonomic range:
  • Synonym(s):

Reaction(s) found

1 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-3385&oldid=21347"