Difference between revisions of "RXN-13303"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11758 RXN-11758] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13303 RXN-13303] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11758 RXN-11758] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13303 RXN-13303] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.64 EC-2.1.1.64]
+
** [http://enzyme.expasy.org/EC/4.2.1.134 EC-4.2.1.134]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Demethylated-Ubiquinols]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[Ubiquinols]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
+
** 1 [[CPD-14276]][c] '''=>''' 1 [[CPD-14281]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a demethylated ubiquinol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 an ubiquinol[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
+
** 1 (3R)-3-hydroxy-behenoyl-CoA[c] '''=>''' 1 trans-docos-2-enoyl-CoA[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[CHC_T00000517001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
−
* [[CHC_T00005416001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
−
* [[CHC_T00001339001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
−
* [[CHC_T00000214001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7036]], very long chain fatty acid biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7036 PWY-7036]
 +
** '''8''' reactions found over '''16''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[meneco]]
 +
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R08781 R08781]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.1.1.64}}
+
{{#set: ec number=EC-4.2.1.134}}
−
{{#set: gene associated=CHC_T00000517001_1|CHC_T00005416001_1|CHC_T00001339001_1|CHC_T00000214001_1}}
+
{{#set: in pathway=PWY-7036}}
−
{{#set: in pathway=}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction comment=added for gapfilling}}

Latest revision as of 16:41, 23 May 2018

Reaction RXN-13303

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (3R)-3-hydroxy-behenoyl-CoA[c] => 1 trans-docos-2-enoyl-CoA[c] + 1 H2O[c]

Genes associated with this reaction

Pathways

  • PWY-7036, very long chain fatty acid biosynthesis II: PWY-7036
    • 8 reactions found over 16 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-13303&oldid=15003"