Difference between revisions of "RXN66-313"

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(Created page with "Category:Gene == Gene CHC_T00010058001 == * left end position: ** 50466 * transcription direction: ** POSITIVE * right end position: ** 51689 * centisome position: ** 9.34...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00010058001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-313 RXN66-313] ==
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* left end position:
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* direction:
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** 50466
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/1.1.1.170 EC-1.1.1.170]
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* right end position:
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** 51689
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* centisome position:
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** 9.341991   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[CPD-4577]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CPD-4578]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 4α-carboxy-4β-methyl-5α-cholesta-8,24-dien-3β-ol[c] '''+''' 1 NAD(P)+[c] '''=>''' 1 3-dehydro-4-methylzymosterol[c] '''+''' 1 CO2[c] '''+''' 1 NAD(P)H[c]
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* [[TRNA-CHARGING-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00003646001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways ==
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* [[PWY-6074]], zymosterol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6074 PWY-6074]
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** '''10''' reactions found over '''12''' reactions in the full pathway
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* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-4 PWY66-4]
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** '''16''' reactions found over '''22''' reactions in the full pathway
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* [[PWY66-341]], cholesterol biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-341 PWY66-341]
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** '''15''' reactions found over '''22''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=50466}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33448 33448]
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{{#set: right end position=51689}}
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* LIGAND-RXN:
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{{#set: centisome position=9.341991    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R07494 R07494]
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{{#set: reaction associated=TRYPTOPHAN--TRNA-LIGASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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{{#set: ec number=EC-1.1.1.170}}
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{{#set: gene associated=CHC_T00003646001_1}}
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{{#set: in pathway=PWY-6074|PWY66-4|PWY66-341}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:17, 9 January 2019

Reaction RXN66-313

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6074, zymosterol biosynthesis: PWY-6074
    • 10 reactions found over 12 reactions in the full pathway
  • PWY66-4, cholesterol biosynthesis III (via desmosterol): PWY66-4
    • 16 reactions found over 22 reactions in the full pathway
  • PWY66-341, cholesterol biosynthesis I: PWY66-341
    • 15 reactions found over 22 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN66-313&oldid=21543"