Difference between revisions of "NONMEVIPP-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14973 RXN-14973] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14973 RXN-14973] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** methylerythritol phosphate pathway I
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* taxonomic range:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* Synonym(s):
 
* Synonym(s):
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** nonmevalonate isopentenyl diphosphate biosynthesis
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** methylerythritol phosphate degradation
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** MEP degradation
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** deoxyxylulose phosphate pathway
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** DOXP pathway
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** Rohmer pathway
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** isopentenyl diphosphate biosynthesis -- mevalonate-independent
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** nonmevalonate isoprenoid pathway
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** MEP pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''7''' reactions found over '''9''' reactions in the full pathway
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** 1 [[3-Oxo-octanoyl-ACPs]][c] '''+''' 2 [[NADPH]][c] '''+''' 2 [[PROTON]][c] '''=>''' 2 [[NADP]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
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* [[2.7.1.148-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 a 3-oxo-octanoyl-[acp][c] '''+''' 2 NADPH[c] '''+''' 2 H+[c] '''=>''' 2 NADP+[c] '''+''' 1 an octanoyl-[acp][c] '''+''' 1 H2O[c]
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*** [[CHC_T00003708001_1]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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*** [[orthology-arabidopsis_thaliana]]
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* [[PWY-7388]], octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7388 PWY-7388]
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*** [[orthology-ectocarpus_siliculosus]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[DXPREDISOM-RXN]]
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== Reconstruction information  ==
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** 1 associated gene(s):
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* [[gap-filling]]:
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*** [[CHC_T00009191001_1]]
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** [[meneco]]:
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** 3 reconstruction source(s) associated:
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*** [[added for gapfilling]]
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[DXS-RXN]]
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** 9 associated gene(s):
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*** [[CHC_T00003402001_1]]
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*** [[CHC_T00008758001]]
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*** [[CHC_T00001454001_1]]
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*** [[CHC_T00000865001_1]]
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*** [[CHC_T00009061001_1]]
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*** [[CHC_T00008758001_1]]
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*** [[CHC_T00003376001_1]]
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*** [[CHC_T00001730001_1]]
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*** [[CHC_T00000866001_1]]
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** 4 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[IPPISOM-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00001581001_1]]
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*** [[CHC_T00006126001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[ISPH2-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00008841001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN0-302]]
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** 2 associated gene(s):
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*** [[CHC_T00009483001_1]]
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*** [[CHC_T00009483001]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN0-884]]
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** 1 associated gene(s):
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*** [[CHC_T00008841001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.60-RXN 2.7.7.60-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-15878 RXN-15878]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* ECOCYC:
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{{#set: in pathway=PWY-7388}}
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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{{#set: reconstruction category=gap-filling}}
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* ARACYC:
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{{#set: reconstruction tool=meneco}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
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{{#set: reconstruction source=added for gapfilling}}
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{{#set: common name=methylerythritol phosphate pathway I}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: common name=nonmevalonate isopentenyl diphosphate biosynthesis|methylerythritol phosphate degradation|MEP degradation|deoxyxylulose phosphate pathway|DOXP pathway|Rohmer pathway|isopentenyl diphosphate biosynthesis -- mevalonate-independent|nonmevalonate isoprenoid pathway|MEP pathway}}
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{{#set: reaction found=7}}
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{{#set: total reaction=9}}
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{{#set: completion rate=78.0}}

Latest revision as of 16:14, 9 January 2019

Pathway NONMEVIPP-PWY

  • common name:
    • methylerythritol phosphate pathway I
  • taxonomic range:
  • Synonym(s):
    • nonmevalonate isopentenyl diphosphate biosynthesis
    • methylerythritol phosphate degradation
    • MEP degradation
    • deoxyxylulose phosphate pathway
    • DOXP pathway
    • Rohmer pathway
    • isopentenyl diphosphate biosynthesis -- mevalonate-independent
    • nonmevalonate isoprenoid pathway
    • MEP pathway

Reaction(s) found

7 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=NONMEVIPP-PWY&oldid=21463"