Difference between revisions of "RXN-17896"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11836 RXN-11836] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17896 RXN-17896] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* ec number: | * ec number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/2.1.1 EC-2.1.1] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[CPD-19220]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[CPD-18779]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 (S)-demethyl-4-deoxygadusol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 (S)-4-deoxygadusol[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[CHC_T00001829001]] |
| − | ** [[ | + | ** Source: [[manual-pathmodel_inference]] |
| − | + | ||
| − | + | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-7751]], shinorine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7751 PWY-7751] | ||
| + | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[manual]] |
| − | ** [[ | + | ** Source: [[manual-pathmodel_inference]] |
| − | *** [[ | + | *** Comment: [[methyltransf_3 domain;meneco;brawley2017]] |
| + | * Category: [[gap-filling]] | ||
| + | ** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]] | ||
| + | *** Tool: [[meneco]] | ||
| + | **** Comment: [[added for gapfilling]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: ec number=EC- | + | {{#set: ec number=EC-2.1.1}} |
| − | {{#set: gene associated= | + | {{#set: gene associated=CHC_T00001829001}} |
| − | {{#set: in pathway=}} | + | {{#set: in pathway=PWY-7751}} |
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=manual|gap-filling}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction source=manual-pathmodel_inference|gap-filling-gapfilling_solution_with_meneco_draft_medium}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction tool=meneco}} |
| + | {{#set: reconstruction comment=methyltransf_3 domain;meneco;brawley2017|added for gapfilling}} | ||
Latest revision as of 16:21, 9 January 2019
Contents
Reaction RXN-17896
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-19220[c] + 1 S-ADENOSYLMETHIONINE[c] => 1 CPD-18779[c] + 1 PROTON[c] + 1 ADENOSYL-HOMO-CYS[c]
- With common name(s):
- 1 (S)-demethyl-4-deoxygadusol[c] + 1 S-adenosyl-L-methionine[c] => 1 (S)-4-deoxygadusol[c] + 1 H+[c] + 1 S-adenosyl-L-homocysteine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00001829001
- Source: manual-pathmodel_inference
Pathways
Reconstruction information
- Category: manual
- Source: manual-pathmodel_inference
- Category: gap-filling
- Source: gap-filling-gapfilling_solution_with_meneco_draft_medium
- Tool: meneco
- Comment: added for gapfilling
- Tool: meneco
- Source: gap-filling-gapfilling_solution_with_meneco_draft_medium
