Difference between revisions of "GLYCOGENSYN-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXYURIDINE DEOXYURIDINE] == * smiles: ** C1(=CN(C(=O)NC(=O)1)C2(CC(O)C(CO)O2)) * inchi key: *...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DEOXYURIDINE DEOXYURIDINE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOGENSYN-RXN GLYCOGENSYN-RXN] ==
* smiles:
+
* direction:
** C1(=CN(C(=O)NC(=O)1)C2(CC(O)C(CO)O2))
+
** REVERSIBLE
* inchi key:
+
** InChIKey=MXHRCPNRJAMMIM-SHYZEUOFSA-N
+
 
* common name:
 
* common name:
** 2'-deoxyuridine
+
** Starch synthase
* molecular weight:
+
* ec number:
** 228.204   
+
** [http://enzyme.expasy.org/EC/2.4.1.21 EC-2.4.1.21]
 
* Synonym(s):
 
* Synonym(s):
** deoxyuridine
 
  
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
== Reaction(s) known to produce the compound ==
+
* With identifiers:
* [[CYTIDEAM-RXN]]
+
** 1 [[ADP-D-GLUCOSE]][c] '''+''' 1 [[1-4-alpha-D-Glucan]][c] '''<=>''' 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[ADP]][c]
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 ADP-&alpha;-D-glucose[c] '''+''' 1 a 1,4-&alpha;-D-glucan[c] '''<=>''' 1 a 1,4-&alpha;-D-glucan[c] '''+''' 1 ADP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00009277001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00009277001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOGENSYNTH-PWY GLYCOGENSYNTH-PWY]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-622]], starch biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-622 PWY-622]
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* CAS : 951-78-0
+
* LIGAND-RXN:
* METABOLIGHTS : MTBLC16450
+
** [http://www.genome.jp/dbget-bin/www_bget?R02421 R02421]
* DRUGBANK : DB02256
+
* UNIPROT:
* PUBCHEM:
+
** [http://www.uniprot.org/uniprot/P45179 P45179]
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=13712 13712]
+
** [http://www.uniprot.org/uniprot/Q40739 Q40739]
* HMDB : HMDB00012
+
** [http://www.uniprot.org/uniprot/P39125 P39125]
* LIGAND-CPD:
+
** [http://www.uniprot.org/uniprot/Q43784 Q43784]
** [http://www.genome.jp/dbget-bin/www_bget?C00526 C00526]
+
** [http://www.uniprot.org/uniprot/P72623 P72623]
* CHEMSPIDER:
+
** [http://www.uniprot.org/uniprot/P0A6U8 P0A6U8]
** [http://www.chemspider.com/Chemical-Structure.13118.html 13118]
+
** [http://www.uniprot.org/uniprot/O48899 O48899]
* CHEBI:
+
** [http://www.uniprot.org/uniprot/O48900 O48900]
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16450 16450]
+
** [http://www.uniprot.org/uniprot/O49064 O49064]
* BIGG : duri
+
** [http://www.uniprot.org/uniprot/Q43654 Q43654]
{{#set: smiles=C1(=CN(C(=O)NC(=O)1)C2(CC(O)C(CO)O2))}}
+
** [http://www.uniprot.org/uniprot/P93568 P93568]
{{#set: inchi key=InChIKey=MXHRCPNRJAMMIM-SHYZEUOFSA-N}}
+
** [http://www.uniprot.org/uniprot/O48515 O48515]
{{#set: common name=2'-deoxyuridine}}
+
** [http://www.uniprot.org/uniprot/O48516 O48516]
{{#set: molecular weight=228.204    }}
+
** [http://www.uniprot.org/uniprot/O64925 O64925]
{{#set: common name=deoxyuridine}}
+
** [http://www.uniprot.org/uniprot/Q42857 Q42857]
{{#set: produced by=CYTIDEAM-RXN}}
+
** [http://www.uniprot.org/uniprot/Q00775 Q00775]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Starch synthase}}
 +
{{#set: ec number=EC-2.4.1.21}}
 +
{{#set: gene associated=CHC_T00009277001_1|CHC_T00009277001}}
 +
{{#set: in pathway=GLYCOGENSYNTH-PWY|PWY-622}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:22, 9 January 2019

Reaction GLYCOGENSYN-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Starch synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links