Difference between revisions of "THREONINE-ALDOLASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCCOASYN-RXN SUCCCOASYN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy....")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE-ALDOLASE-RXN THREONINE-ALDOLASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [ht...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCCOASYN-RXN SUCCCOASYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE-ALDOLASE-RXN THREONINE-ALDOLASE-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.5 EC-6.2.1.5]
+
** [http://enzyme.expasy.org/EC/4.1.2.48 EC-4.1.2.48]
 +
** [http://enzyme.expasy.org/EC/4.1.2.5 EC-4.1.2.5]
 
* Synonym(s):
 
* Synonym(s):
−
** Succinate thiokinase
 
−
** succinyl CoA synthesis
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SUC]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[SUC-COA]][c]
+
** 1 [[THR]][c] '''=>''' 1 [[GLY]][c] '''+''' 1 [[ACETALD]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 succinate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''<=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 succinyl-CoA[c]
+
** 1 L-threonine[c] '''=>''' 1 glycine[c] '''+''' 1 acetaldehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[CHC_T00008602001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
−
** [[pantograph]]-[[a.taliana]]
 
−
* [[CHC_T00009212001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
−
** [[pantograph]]-[[a.taliana]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
+
* [[GLYSYN-THR-PWY]], glycine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=GLYSYN-THR-PWY GLYSYN-THR-PWY]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY]
+
* [[PWY-5436]], L-threonine degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5436 PWY-5436]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
+
−
** '''5''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY-5392]], reductive TCA cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392]
+
−
** '''5''' reactions found over '''12''' reactions in the full pathway
+
−
* [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY]
+
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
+
−
** '''8''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY-5537]], pyruvate fermentation to acetate V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5537 PWY-5537]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
+
−
** '''9''' reactions found over '''18''' reactions in the full pathway
+
−
* [[PWY-5538]], pyruvate fermentation to acetate VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5538 PWY-5538]
+
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
+
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
−
* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA]
+
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
+
** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[meneco]]
−
*** [[a.taliana]]
+
**** Comment: [[added for gapfilling]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17661 17661]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19625 19625]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00405 R00405]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00751 R00751]
−
* UNIPROT:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.uniprot.org/uniprot/O28098 O28098]
+
{{#set: ec number=EC-4.1.2.48}}
−
** [http://www.uniprot.org/uniprot/P53594 P53594]
+
{{#set: ec number=EC-4.1.2.5}}
−
** [http://www.uniprot.org/uniprot/O28733 O28733]
+
{{#set: in pathway=GLYSYN-THR-PWY|PWY-5436}}
−
** [http://www.uniprot.org/uniprot/P45101 P45101]
+
{{#set: reconstruction category=gap-filling}}
−
** [http://www.uniprot.org/uniprot/P45102 P45102]
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
** [http://www.uniprot.org/uniprot/Q9JUT0 Q9JUT0]
+
{{#set: reconstruction tool=meneco}}
−
** [http://www.uniprot.org/uniprot/Q58643 Q58643]
+
{{#set: reconstruction comment=added for gapfilling}}
−
** [http://www.uniprot.org/uniprot/O26663 O26663]
+
−
** [http://www.uniprot.org/uniprot/P80886 P80886]
+
−
** [http://www.uniprot.org/uniprot/Q9PHY1 Q9PHY1]
+
−
** [http://www.uniprot.org/uniprot/Q9JUS9 Q9JUS9]
+
−
** [http://www.uniprot.org/uniprot/P80865 P80865]
+
−
** [http://www.uniprot.org/uniprot/Q9PHY0 Q9PHY0]
+
−
** [http://www.uniprot.org/uniprot/O67729 O67729]
+
−
** [http://www.uniprot.org/uniprot/O67546 O67546]
+
−
** [http://www.uniprot.org/uniprot/P53593 P53593]
+
−
** [http://www.uniprot.org/uniprot/P0AGE9 P0AGE9]
+
−
** [http://www.uniprot.org/uniprot/P0A836 P0A836]
+
−
** [http://www.uniprot.org/uniprot/O82662 O82662]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: ec number=EC-6.2.1.5}}
+
−
{{#set: common name=Succinate thiokinase|succinyl CoA synthesis}}
+
−
{{#set: gene associated=CHC_T00008602001_1|CHC_T00009212001_1}}
+
−
{{#set: in pathway=PWY-5913|P42-PWY|PWY-7384|PWY-5392|P23-PWY|PWY-6969|PWY-5537|PWY-6728|PWY-5538|PWY-5690|PWY66-398|TCA}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+

Latest revision as of 16:46, 23 May 2018

Reaction THREONINE-ALDOLASE-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-threonine[c] => 1 glycine[c] + 1 acetaldehyde[c]

Genes associated with this reaction

Pathways

Reconstruction information

External links





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