Difference between revisions of "CHLOROPHYLL-SYN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1223 RXN-1223] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/3....")
 
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1223 RXN-1223] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN] ==
−
* direction:
+
* common name:
−
** LEFT-TO-RIGHT
+
** 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
−
* ec number:
+
* taxonomic range:
−
** [http://enzyme.expasy.org/EC/3.13.1.1 EC-3.13.1.1]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* Synonym(s):
 
* Synonym(s):
 +
** light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''9''' reactions found over '''9''' reactions in the full pathway
−
** 1 [[SO3]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[UDP-SULFOQUINOVOSE]][c] '''+''' 1 [[WATER]][c]
+
* [[PROTOPORGENOXI-RXN]]
−
* With common name(s):
+
** 3 associated gene(s):
−
** 1 sulfite[c] '''+''' 1 H+[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 UDP-α-D-sulfoquinovopyranose[c] '''+''' 1 H2O[c]
+
*** [[CHC_T00000813001_1]]
−
 
+
*** [[CHC_T00001062001_1]]
−
== Genes associated with this reaction  ==
+
*** [[CHC_T00004880001_1]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 3 reconstruction source(s) associated:
−
* [[CHC_T00009188001_1]]
+
*** [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
*** [[orthology-arabidopsis_thaliana]]
−
** [[pantograph]]-[[a.taliana]]
+
*** [[orthology-ectocarpus_siliculosus]]
−
== Pathways  ==
+
* [[RXN-5282]]
−
* [[PWYQT-4427]], sulfoquinovosyl diacylglycerol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYQT-4427 PWYQT-4427]
+
** 1 associated gene(s):
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
*** [[CHC_670]]
−
== Reconstruction information  ==
+
** 1 reconstruction source(s) associated:
−
* [[orthology]]:
+
*** [[annotation-original_genome]]
−
** [[pantograph]]:
+
* [[RXN-5283]]
−
*** [[galdieria.sulphuraria]]
+
** 1 associated gene(s):
−
*** [[a.taliana]]
+
*** [[CHC_670]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
* [[RXN-5284]]
 +
** 1 associated gene(s):
 +
*** [[CHC_670]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
* [[RXN-5285]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00009425001]]
 +
*** [[CHC_T00009425001_1]]
 +
*** [[CHC_T00010090001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
* [[RXN0-1461]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00003096001_1]]
 +
*** [[CHC_T00002160001_1]]
 +
*** [[CHC_T00008857001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN1F-20]]
 +
** 5 associated gene(s):
 +
*** [[CHC_T00008422001]]
 +
*** [[CHC_T00008032001_1]]
 +
*** [[CHC_T00000990001_1]]
 +
*** [[CHC_T00008429001_1]]
 +
*** [[CHC_T00008422001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[UROGENDECARBOX-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00008531001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: common name=3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13197 13197]
+
{{#set: taxonomic range=TAX-2763}}
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-33682}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R05775 R05775]
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-33090}}
−
{{#set: ec number=EC-3.13.1.1}}
+
{{#set: common name=light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I}}
−
{{#set: gene associated=CHC_T00009188001_1}}
+
{{#set: reaction found=9}}
−
{{#set: in pathway=PWYQT-4427}}
+
{{#set: total reaction=9}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: completion rate=100.0}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+

Latest revision as of 16:18, 9 January 2019

Pathway CHLOROPHYLL-SYN

  • common name:
    • 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent)
  • taxonomic range:
  • Synonym(s):
    • light-dependent aerobic 3,8-divinyl-chlorophyllide a biosynthesis I

Reaction(s) found

9 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHLOROPHYLL-SYN&oldid=21562"