Difference between revisions of "DIHYDROXYMETVALDEHYDRAT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCDPKIN-RXN DCDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside-diphosphate...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DCDPKIN-RXN DCDPKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROXYMETVALDEHYDRAT-RXN DIHYDROXYMETVALDEHYDRAT-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** nucleoside-diphosphate kinase
+
** 2,3-Dihydroxy-3-methylvalerate dehydratase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
+
** [http://enzyme.expasy.org/EC/4.2.1.9 EC-4.2.1.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DCDP]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DCTP]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[1-KETO-2-METHYLVALERATE]][c] '''=>''' 1 [[2-KETO-3-METHYL-VALERATE]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 dCDP[c] '''+''' 1 ATP[c] '''=>''' 1 dCTP[c] '''+''' 1 ADP[c]
+
** 1 (R)-2,3-dihydroxy-3-methylpentanoate[c] '''=>''' 1 (S)-3-methyl-2-oxopentanoate[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009258001]]
+
* Gene: [[CHC_T00009385001_1]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-galdieria.sulphuraria]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00009233001]]
+
** Source: [[orthology-arabidopsis_thaliana]]
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009258001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00009233001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
+
* [[PWY-5101]], L-isoleucine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
+
* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
+
* [[PWY-5104]], L-isoleucine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5104 PWY-5104]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7197 PWY-7197]
+
* [[PWY-5103]], L-isoleucine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5103 PWY-5103]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
+
−
** '''12''' reactions found over '''17''' reactions in the full pathway
+
−
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
** Source: [[orthology-arabidopsis_thaliana]]
−
* [[annotation]]:
+
*** Tool: [[pantograph]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[original_genome]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27678 27678]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27694 27694]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P55186 P55186]
 +
** [http://www.uniprot.org/uniprot/Q9JUE0 Q9JUE0]
 +
** [http://www.uniprot.org/uniprot/P05791 P05791]
 +
** [http://www.uniprot.org/uniprot/Q9UZ03 Q9UZ03]
 +
** [http://www.uniprot.org/uniprot/P44851 P44851]
 +
** [http://www.uniprot.org/uniprot/Q02139 Q02139]
 +
** [http://www.uniprot.org/uniprot/Q9PJ98 Q9PJ98]
 +
** [http://www.uniprot.org/uniprot/P39522 P39522]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02326 R02326]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05070 R05070]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=nucleoside-diphosphate kinase}}
+
{{#set: common name=2,3-Dihydroxy-3-methylvalerate dehydratase}}
−
{{#set: ec number=EC-2.7.4.6}}
+
{{#set: ec number=EC-4.2.1.9}}
−
{{#set: gene associated=CHC_T00009258001|CHC_T00009233001|CHC_T00009258001_1|CHC_T00009233001_1}}
+
{{#set: gene associated=CHC_T00009385001_1}}
−
{{#set: in pathway=PWY-7210|PWY-7198|PWY-7184|PWY-7197|PWY0-166|PWY-6545}}
+
{{#set: in pathway=PWY-5101|ILEUSYN-PWY|PWY-5104|PWY-5103}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 16:27, 9 January 2019

Reaction DIHYDROXYMETVALDEHYDRAT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2,3-Dihydroxy-3-methylvalerate dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5101, L-isoleucine biosynthesis II: PWY-5101
    • 4 reactions found over 8 reactions in the full pathway
  • ILEUSYN-PWY, L-isoleucine biosynthesis I (from threonine): ILEUSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5104, L-isoleucine biosynthesis IV: PWY-5104
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5103, L-isoleucine biosynthesis III: PWY-5103
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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