Difference between revisions of "RXN-17366"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16313 RXN-16313] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17366 RXN-17366] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16313 RXN-16313] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17366 RXN-17366] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.3.2.24 EC-2.3.2.24]
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** [http://enzyme.expasy.org/EC/2.1.1 EC-2.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[S-ubiquitinyl-E3-independent-E2-Cys]][c] '''+''' 1 [[Protein-L-lysine]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PROTEIN-N-UBIQUITYL-LYSINE]][c] '''+''' 1 [[E3-independent-Ubiquitin-E2-L-cysteine]][c]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-18773]][c] '''=>''' 1 [[CPD-18776]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
 
* With common name(s):
 
* With common name(s):
** 1 an S-ubiquitinyl-[(E3-independent) E2 ubiquitin-conjugating enzyme]-L-cysteine[c] '''+''' 1 a [protein]-L-lysine[c] '''=>''' 1 H+[c] '''+''' 1 an N6-monoubiquitinyl-[protein]-L-lysine[c] '''+''' 1 an [(E3-independent) E2 ubiquitin-conjugating enzyme]-L-cysteine[c]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 (R)-demethyl-4-deoxygadusol[c] '''=>''' 1 (R)-4-deoxygadusol[c] '''+''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Genes have been associated with this reaction based on different elements listed below.
 
* [[CHC_T00002999001_1]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-7511]], protein ubiquitylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7511 PWY-7511]
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* [[PWY-7751]], shinorine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7751 PWY-7751]
** '''9''' reactions found over '''9''' reactions in the full pathway
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** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
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* Category: [[gap-filling]]
** [[pantograph]]:
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
*** [[galdieria.sulphuraria]]
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*** Tool: [[meneco]]
* [[annotation]]:
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**** Comment: [[added for gapfilling]]
** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-2.3.2.24}}
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{{#set: ec number=EC-2.1.1}}
{{#set: gene associated=CHC_T00002999001_1}}
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{{#set: in pathway=PWY-7751}}
{{#set: in pathway=PWY-7511}}
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{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction tool=meneco}}
{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 15:50, 23 May 2018

Reaction RXN-17366

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7751, shinorine biosynthesis: PWY-7751
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links