Difference between revisions of "GLURS-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICOTINATEPRIBOSYLTRANS-RXN NICOTINATEPRIBOSYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * ec numb...")
 
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=NICOTINATEPRIBOSYLTRANS-RXN NICOTINATEPRIBOSYLTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLURS-RXN GLURS-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.4.21 EC-6.3.4.21]
+
** [http://enzyme.expasy.org/EC/6.1.1.17 EC-6.1.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PRPP]][c] '''+''' 1 [[NIACINE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[GLT]][c] '''+''' 1 [[GLT-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-GLT-tRNAs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 5-phospho-α-D-ribose 1-diphosphate[c] '''+''' 1 nicotinate[c] '''+''' 1 ATP[c] '''+''' 1 H2O[c] '''=>''' 1 ADP[c] '''+''' 1 β-nicotinate D-ribonucleotide[c] '''+''' 1 diphosphate[c] '''+''' 1 phosphate[c]
+
** 1 L-glutamate[c] '''+''' 1 a tRNAglu[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-glutamyl-[tRNAGlu][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00004416001_1]]
+
* Gene: [[CHC_T00002361001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008453001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381]
+
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5188 PWY-5188]
−
** '''6''' reactions found over '''11''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY]
+
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13393 13393]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23540 23540]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R01724 R01724]
+
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P22253 P22253]
+
** [http://www.uniprot.org/uniprot/P47700 P47700]
−
** [http://www.uniprot.org/uniprot/P18133 P18133]
+
** [http://www.uniprot.org/uniprot/O52914 O52914]
−
** [http://www.uniprot.org/uniprot/P39683 P39683]
+
** [http://www.uniprot.org/uniprot/P43818 P43818]
 +
** [http://www.uniprot.org/uniprot/O26157 O26157]
 +
** [http://www.uniprot.org/uniprot/Q9ZLJ1 Q9ZLJ1]
 +
** [http://www.uniprot.org/uniprot/O25360 O25360]
 +
** [http://www.uniprot.org/uniprot/O51345 O51345]
 +
** [http://www.uniprot.org/uniprot/Q9Z7Z3 Q9Z7Z3]
 +
** [http://www.uniprot.org/uniprot/P96551 P96551]
 +
** [http://www.uniprot.org/uniprot/O67271 O67271]
 +
** [http://www.uniprot.org/uniprot/O83679 O83679]
 +
** [http://www.uniprot.org/uniprot/Q9ZLZ7 Q9ZLZ7]
 +
** [http://www.uniprot.org/uniprot/Q9PP78 Q9PP78]
 +
** [http://www.uniprot.org/uniprot/Q9CDZ7 Q9CDZ7]
 +
** [http://www.uniprot.org/uniprot/O84451 O84451]
 +
** [http://www.uniprot.org/uniprot/Q9X2I8 Q9X2I8]
 +
** [http://www.uniprot.org/uniprot/Q9JWT4 Q9JWT4]
 +
** [http://www.uniprot.org/uniprot/Q9ZDK3 Q9ZDK3]
 +
** [http://www.uniprot.org/uniprot/Q9X172 Q9X172]
 +
** [http://www.uniprot.org/uniprot/Q58772 Q58772]
 +
** [http://www.uniprot.org/uniprot/Q9ZCT8 Q9ZCT8]
 +
** [http://www.uniprot.org/uniprot/P59690 P59690]
 +
** [http://www.uniprot.org/uniprot/Q43768 Q43768]
 +
** [http://www.uniprot.org/uniprot/Q43794 Q43794]
 +
** [http://www.uniprot.org/uniprot/P46655 P46655]
 +
** [http://www.uniprot.org/uniprot/P48525 P48525]
 +
** [http://www.uniprot.org/uniprot/P75114 P75114]
 +
** [http://www.uniprot.org/uniprot/Q49061 Q49061]
 +
** [http://www.uniprot.org/uniprot/P22249 P22249]
 +
** [http://www.uniprot.org/uniprot/P22250 P22250]
 +
** [http://www.uniprot.org/uniprot/P04805 P04805]
 +
** [http://www.uniprot.org/uniprot/P07814 P07814]
 +
** [http://www.uniprot.org/uniprot/P15189 P15189]
 +
** [http://www.uniprot.org/uniprot/O65253 O65253]
 +
** [http://www.uniprot.org/uniprot/O68055 O68055]
 +
** [http://www.uniprot.org/uniprot/O68142 O68142]
 +
** [http://www.uniprot.org/uniprot/O86528 O86528]
 +
** [http://www.uniprot.org/uniprot/O13775 O13775]
 +
** [http://www.uniprot.org/uniprot/Q9ZFA3 Q9ZFA3]
 +
** [http://www.uniprot.org/uniprot/O82462 O82462]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05578 R05578]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.3.4.21}}
+
{{#set: ec number=EC-6.1.1.17}}
−
{{#set: gene associated=CHC_T00004416001_1}}
+
{{#set: gene associated=CHC_T00002361001_1|CHC_T00008453001_1}}
−
{{#set: in pathway=PWY-5381|PYRIDNUCSAL-PWY}}
+
{{#set: in pathway=PWY-5188|TRNA-CHARGING-PWY}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 

Latest revision as of 16:30, 9 January 2019

Reaction GLURS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamate[c] + 1 a tRNAglu[c] + 1 ATP[c] => 1 AMP[c] + 1 diphosphate[c] + 1 an L-glutamyl-[tRNAGlu][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GLURS-RXN&oldid=21834"