Difference between revisions of "PWY-5083"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN] == * direction: ** LEFT-...")
 
 
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5083 PWY-5083] ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** NAD/NADH phosphorylation and dephosphorylation
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/2.5.1.84 EC-2.5.1.84]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''6''' reactions in the full pathway
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** 7 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYL-PP]][c] '''=>''' 1 [[SOLANESYL-PYROPHOSPHATE]][c] '''+''' 7 [[PPI]][c]
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* [[NAD-KIN-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 7 isopentenyl diphosphate[c] '''+''' 1 geranyl diphosphate[c] '''=>''' 1 all-trans-nonaprenyl diphosphate[c] '''+''' 7 diphosphate[c]
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*** [[CHC_T00003138001_1]]
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*** [[CHC_T00004045001_1]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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== Pathways  ==
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*** [[orthology-galdieria.sulphuraria]]
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* [[PWY-5805]], nonaprenyl diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5805 PWY-5805]
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*** [[orthology-ectocarpus_siliculosus]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[NADH-DEHYDROG-A-RXN]]
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== Reconstruction information  ==
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** 18 associated gene(s):
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* [[gap-filling]]:
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*** [[CHC_T00009333001_1]]
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** [[meneco]]:
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*** [[CHC_T00007090001_1]]
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*** [[added for gapfilling]]
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*** [[CHC_T00003883001_1]]
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*** [[CHC_T00008807001_1]]
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*** [[CHC_T00006423001_1]]
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*** [[CHC_T00010112001_1]]
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*** [[CHC_T00001734001_1]]
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*** [[CHC_T00010220001_1]]
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*** [[CHC_T00004832001_1]]
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*** [[CHC_T00007379001_1]]
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*** [[CHC_T00004265001_1]]
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*** [[CHC_T00008467001_1]]
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*** [[CHC_T00009463001_1]]
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*** [[CHC_T00010087001_1]]
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*** [[CHC_T00000309001_1]]
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*** [[CHC_T00009457001_1]]
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*** [[CHC_T00008582001_1]]
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*** [[CHC_T00010290001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[PYRNUTRANSHYDROGEN-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00008930001_1]]
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*** [[CHC_T00008930001]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-5822]]
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** 4 associated gene(s):
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*** [[CHC_T00000494001_1]]
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*** [[CHC_T00005741001_1]]
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*** [[CHC_T00002031001_1]]
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*** [[CHC_T00001956001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=NADH-KINASE-RXN NADH-KINASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7703 RXN-7703]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ARACYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R09250 R09250]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5083 PWY-5083]
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** [http://www.genome.jp/dbget-bin/www_bget?R07267 R07267]
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{{#set: common name=NAD/NADH phosphorylation and dephosphorylation}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: ec number=EC-2.5.1.84}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: in pathway=PWY-5805}}
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{{#set: reaction found=4}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: total reaction=6}}
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{{#set: reconstruction tool=meneco}}
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{{#set: completion rate=67.0}}
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{{#set: reconstruction source=added for gapfilling}}
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Latest revision as of 17:27, 9 January 2019

Pathway PWY-5083

  • common name:
    • NAD/NADH phosphorylation and dephosphorylation
  • taxonomic range:
  • Synonym(s):

Reaction(s) found

4 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5083&oldid=21779"