Difference between revisions of "PWY-5189"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9366 RXN-9366] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
 
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9366 RXN-9366] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5189 PWY-5189] ==
* direction:
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* common name:
** LEFT-TO-RIGHT
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** tetrapyrrole biosynthesis II (from glycine)
* ec number:
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* taxonomic range:
** [http://enzyme.expasy.org/EC/2.1.1.163 EC-2.1.1.163]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1883 TAX-1883]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33682 TAX-33682]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33630 TAX-33630]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
** 1 [[CPD-12122]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-12130]][c]
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* [[5-AMINOLEVULINIC-ACID-SYNTHASE-RXN]]
* With common name(s):
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** 0 associated gene:
** 1 demethylmenaquinol-13[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] '''+''' 1 menaquinol-13[c]
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** 1 reconstruction source(s) associated:
 
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
== Genes associated with this reaction  ==
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* [[OHMETHYLBILANESYN-RXN]]
Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
* [[CHC_T00001339001_1]]
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*** [[CHC_T00003649001_1]]
** [[pantograph]]-[[galdieria.sulphuraria]]
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** 3 reconstruction source(s) associated:
* [[CHC_T00005416001_1]]
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*** [[orthology-galdieria.sulphuraria]]
** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[orthology-arabidopsis_thaliana]]
* [[CHC_T00000214001_1]]
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*** [[orthology-ectocarpus_siliculosus]]
** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[PORPHOBILSYNTH-RXN]]
* [[CHC_T00000517001_1]]
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** 2 associated gene(s):
** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[CHC_T00008491001]]
== Pathways  ==
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*** [[CHC_T00008491001_1]]
* [[PWY-5895]], menaquinol-13 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5895 PWY-5895]
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** 4 reconstruction source(s) associated:
** '''1''' reactions found over '''2''' reactions in the full pathway
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*** [[orthology-galdieria.sulphuraria]]
== Reconstruction information  ==
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*** [[annotation-original_genome]]
* [[orthology]]:
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*** [[orthology-arabidopsis_thaliana]]
** [[pantograph]]:
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*** [[orthology-ectocarpus_siliculosus]]
*** [[galdieria.sulphuraria]]
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* [[UROGENIIISYN-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00007253001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=tetrapyrrole biosynthesis II (from glycine)}}
{{#set: ec number=EC-2.1.1.163}}
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{{#set: taxonomic range=TAX-1883}}
{{#set: gene associated=CHC_T00001339001_1|CHC_T00005416001_1|CHC_T00000214001_1|CHC_T00000517001_1}}
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{{#set: taxonomic range=TAX-33682}}
{{#set: in pathway=PWY-5895}}
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{{#set: taxonomic range=TAX-33630}}
{{#set: reconstruction category=orthology}}
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{{#set: taxonomic range=TAX-1224}}
{{#set: reconstruction tool=pantograph}}
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{{#set: taxonomic range=TAX-33208}}
{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: taxonomic range=TAX-4751}}
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{{#set: reaction found=4}}
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{{#set: total reaction=4}}
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{{#set: completion rate=100.0}}

Latest revision as of 17:31, 9 January 2019

Pathway PWY-5189

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links