Difference between revisions of "PWY-6733"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] == * direction: ** REVERSIBLE * common name: ** Glutamate dehydrogenas...")
 
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6733 PWY-6733] ==
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* direction:
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** REVERSIBLE
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* common name:
 
* common name:
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** Glutamate dehydrogenase
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** sporopollenin precursors biosynthesis
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* ec number:
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* taxonomic range:
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** [http://enzyme.expasy.org/EC/1.4.1.4 EC-1.4.1.4]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3193 TAX-3193]
 
* Synonym(s):
 
* Synonym(s):
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** sporopollenin monomer biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''18''' reactions in the full pathway
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** 1 [[GLT]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-12184]]
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* With common name(s):
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** 6 associated gene(s):
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** 1 L-glutamate[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c] '''<=>''' 1 NADPH[c] '''+''' 1 ammonium[c] '''+''' 1 2-oxoglutarate[c] '''+''' 1 H+[c]
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*** [[CHC_T00009428001]]
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*** [[CHC_T00008811001_1]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00008160001_1]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[CHC_T00008811001]]
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* [[CHC_T00010235001]]
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*** [[CHC_T00009428001_1]]
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** ORIGINAL_GENOME
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*** [[CHC_T00008500001_1]]
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***AUTOMATED-NAME-MATCH
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** 3 reconstruction source(s) associated:
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* [[CHC_T00010235001_1]]
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*** [[orthology-galdieria.sulphuraria]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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== Pathways  ==
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*** [[orthology-ectocarpus_siliculosus]]
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* [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY]
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* [[RXN-16389]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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** 6 associated gene(s):
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* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
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*** [[CHC_T00008500001_1]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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*** [[CHC_T00009428001]]
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* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
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*** [[CHC_T00008811001_1]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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*** [[CHC_T00009428001_1]]
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* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
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*** [[CHC_T00008160001_1]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** [[CHC_T00008811001]]
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== Reconstruction information  ==
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** 3 reconstruction source(s) associated:
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* [[orthology]]:
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*** [[orthology-galdieria.sulphuraria]]
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** [[pantograph]]:
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*** [[annotation-original_genome]]
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*** [[galdieria.sulphuraria]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[annotation]]:
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* [[RXN-16401]]
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** [[pathwaytools]]:
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** 6 associated gene(s):
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*** [[original_genome]]
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*** [[CHC_T00008811001_1]]
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*** [[CHC_T00008160001_1]]
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*** [[CHC_T00009428001_1]]
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*** [[CHC_T00009428001]]
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*** [[CHC_T00008500001_1]]
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*** [[CHC_T00008811001]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-16402]]
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** 6 associated gene(s):
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*** [[CHC_T00008500001_1]]
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*** [[CHC_T00008811001]]
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*** [[CHC_T00009428001_1]]
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*** [[CHC_T00008160001_1]]
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*** [[CHC_T00009428001]]
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*** [[CHC_T00008811001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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* [[RXN-9666]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PALMITOYL-COA-HYDROLASE-RXN PALMITOYL-COA-HYDROLASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12186 RXN-12186]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16398 RXN-16398]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16399 RXN-16399]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16400 RXN-16400]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16403 RXN-16403]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16404 RXN-16404]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16405 RXN-16405]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16406 RXN-16406]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16407 RXN-16407]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16408 RXN-16408]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9627 RXN-9627]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=sporopollenin precursors biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11612 11612]
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{{#set: taxonomic range=TAX-3193}}
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* LIGAND-RXN:
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{{#set: common name=sporopollenin monomer biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
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{{#set: reaction found=5}}
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* UNIPROT:
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{{#set: total reaction=18}}
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** [http://www.uniprot.org/uniprot/P07262 P07262]
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{{#set: completion rate=28.000000000000004}}
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** [http://www.uniprot.org/uniprot/P15111 P15111]
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** [http://www.uniprot.org/uniprot/P28724 P28724]
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** [http://www.uniprot.org/uniprot/P43793 P43793]
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** [http://www.uniprot.org/uniprot/Q9JT56 Q9JT56]
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** [http://www.uniprot.org/uniprot/P00370 P00370]
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** [http://www.uniprot.org/uniprot/P00369 P00369]
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** [http://www.uniprot.org/uniprot/P29507 P29507]
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** [http://www.uniprot.org/uniprot/P28998 P28998]
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** [http://www.uniprot.org/uniprot/P29051 P29051]
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** [http://www.uniprot.org/uniprot/P31026 P31026]
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** [http://www.uniprot.org/uniprot/P39475 P39475]
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** [http://www.uniprot.org/uniprot/P39708 P39708]
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** [http://www.uniprot.org/uniprot/P54387 P54387]
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** [http://www.uniprot.org/uniprot/P54386 P54386]
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** [http://www.uniprot.org/uniprot/P95544 P95544]
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** [http://www.uniprot.org/uniprot/P78804 P78804]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Glutamate dehydrogenase}}
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{{#set: ec number=EC-1.4.1.4}}
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{{#set: gene associated=CHC_T00010235001|CHC_T00010235001_1}}
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{{#set: in pathway=GLUTSYNIII-PWY|PWY-5913|PWY-5675|PWY490-3}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 17:32, 9 January 2019

Pathway PWY-6733

  • common name:
    • sporopollenin precursors biosynthesis
  • taxonomic range:
  • Synonym(s):
    • sporopollenin monomer biosynthesis

Reaction(s) found

5 reactions found over 18 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6733&oldid=21880"