Difference between revisions of "CHC 1080"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.24-RXN 3.2.1.24-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** alpha-mannosidase typ...")
 
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.24-RXN 3.2.1.24-RXN] ==
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== Gene CHC_1080 ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** alpha-mannosidase type II manG
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** gltB
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.2.1.24 EC-3.2.1.24]
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** 160788
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* transcription direction:
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** NEGATIVE
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* right end position:
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** 165380
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* centisome position:
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** 89.28401   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
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** 1 [[Alpha-D-Mannosides]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-13559]][c] '''+''' 1 [[Non-Glycosylated-sugar-Acceptors]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 an α-D-mannoside[c] '''+''' 1 H2O[c] '''=>''' 1 α-D-mannopyranose[c] '''+''' 1 a non glycosylated sugar acceptor[c]
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* Reaction: [[GLUTAMIN-RXN]]
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** Source: [[annotation-original_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12878]]
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* [[CHC_T00008655001]]
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** Source: [[annotation-original_genome]]
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** ORIGINAL_GENOME
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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== Pathways associated ==
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* [[CHC_T00008655001_1]]
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* [[CITRULBIO-PWY]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[PWY-4341]]
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== Pathways ==
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* [[PWY-6549]]
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== Reconstruction information  ==
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* [[PWY-6964]]
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* [[orthology]]:
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* [[GLUTAMINDEG-PWY]]
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: common name=gltB}}
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** [http://www.uniprot.org/uniprot/P21139 P21139]
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{{#set: left end position=160788}}
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** [http://www.uniprot.org/uniprot/P34098 P34098]
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.uniprot.org/uniprot/P39098 P39098]
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{{#set: right end position=165380}}
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** [http://www.uniprot.org/uniprot/P22855 P22855]
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{{#set: centisome position=89.28401    }}
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** [http://www.uniprot.org/uniprot/Q43249 Q43249]
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{{#set: reaction associated=GLUTAMATE-SYNTHASE-FERREDOXIN-RXN|GLUTAMIN-RXN|RXN-12878}}
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** [http://www.uniprot.org/uniprot/O13344 O13344]
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{{#set: pathway associated=CITRULBIO-PWY|PWY-4341|PWY-6549|PWY-6964|GLUTAMINDEG-PWY}}
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** [http://www.uniprot.org/uniprot/O46432 O46432]
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** [http://www.uniprot.org/uniprot/O09159 O09159]
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** [http://www.uniprot.org/uniprot/Q9NTJ4 Q9NTJ4]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=alpha-mannosidase type II manG}}
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{{#set: ec number=EC-3.2.1.24}}
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{{#set: gene associated=CHC_T00008655001|CHC_T00008655001_1}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 16:30, 9 January 2019

Gene CHC_1080

  • common name:
    • gltB
  • left end position:
    • 160788
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 165380
  • centisome position:
    • 89.28401
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_1080&oldid=21838"