Difference between revisions of "RXN-13398"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
 
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13398 RXN-13398] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
* common name:
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* ec number:
** caffeine degradation III (bacteria, via demethylation)
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** [http://enzyme.expasy.org/EC/1.14.13.122 EC-1.14.13.122]
 
* Synonym(s):
 
* Synonym(s):
** caffeine degradation (bacteria)
 
  
== Reaction(s) found ==
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== Reaction Formula ==
* '''2''' reaction(s) found
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* With identifiers:
** [[XANTHINE-OXIDASE-RXN]]
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** 2 [[PROTON]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 2 [[NADPH]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[NADP]][c] '''+''' 3 [[WATER]][c] '''+''' 1 [[CPD-7014]][c]
** [[RXN0-901]]
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* With common name(s):
== Reaction(s) not found ==
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** 2 H+[c] '''+''' 1 chlorophyllide a[c] '''+''' 2 NADPH[c] '''+''' 2 oxygen[c] '''=>''' 2 NADP+[c] '''+''' 3 H2O[c] '''+''' 1 chlorophyllide b[c]
* '''5''' reaction(s) not found
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-13106 RXN-13106]
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== Genes associated with this reaction ==
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-11518 RXN-11518]
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Genes have been associated with this reaction based on different elements listed below.
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-11516 RXN-11516]
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* Gene: [[CHC_T00004024001_1]]
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-11517 RXN-11517]
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** Source: [[orthology-ectocarpus_siliculosus]]
** [http://metacyc.org/META/NEW-IMAGE?object=RXN-11513 RXN-11513]
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* Gene: [[CHC_T00000246001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00006958001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00003882001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* LIGAND-MAP:
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* RHEA:
** [http://www.genome.jp/dbget-bin/www_bget?map00232 map00232]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22139 22139]
* UM-BBD-PWY : caf
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* LIGAND-RXN:
{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R10080 R10080]
{{#set: common name=caffeine degradation III (bacteria, via demethylation)}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=caffeine degradation (bacteria)}}
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{{#set: ec number=EC-1.14.13.122}}
{{#set: reaction found=2}}
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{{#set: gene associated=CHC_T00004024001_1|CHC_T00000246001_1|CHC_T00006958001_1|CHC_T00003882001_1}}
{{#set: reaction not found=5}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:04, 9 January 2019

Reaction RXN-13398

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links