Difference between revisions of "RXN-12518"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16626 RXN-16626] == * direction: ** LEFT-TO-RIGHT * common name: ** beta-ketoacyl reductase **...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16626 RXN-16626] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12518 RXN-12518] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** beta-ketoacyl reductase
+
** acyl-CoA oxidase
−
** 3-oxoacyl-[acyl-carrier-protein] reductase
+
−
** 3-oxoacyl-(acyl-carrier-protein) reductase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[9Z-3-oxo-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3R-9Z-3-hydroxy-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[cis-5-enoyl-CoA]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[trans-2-cis-5-dienoyl-CoA]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 a (9Z)-3-oxo-octadec-9-enoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a (3R,9Z)-3-hydroxy-octadec-9-enoyl-[acp][c] '''+''' 1 NADP+[c]
+
** 1 oxygen[c] '''+''' 1 a cis-5-enoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 a trans2,cis-5-dienoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008517001_1]]
+
* Gene: [[CHC_T00009142001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00008557001]]
+
* Gene: [[CHC_T00008478001_1]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-galdieria.sulphuraria]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00008477001]]
+
* Gene: [[CHC_T00008935001_1]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-galdieria.sulphuraria]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00008496001]]
+
* Gene: [[CHC_T00009531001_1]]
−
** ORIGINAL_GENOME
+
** Source: [[orthology-galdieria.sulphuraria]]
−
***AUTOMATED-NAME-MATCH
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00007910001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008400001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00009531001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00009142001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008400001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008935001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
+
* [[PWY-6837]], fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6837 PWY-6837]
−
** '''14''' reactions found over '''14''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=beta-ketoacyl reductase}}
+
{{#set: common name=acyl-CoA oxidase}}
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] reductase}}
+
{{#set: ec number=EC-1.3.3.6}}
−
{{#set: common name=3-oxoacyl-(acyl-carrier-protein) reductase}}
+
{{#set: gene associated=CHC_T00009142001_1|CHC_T00008478001_1|CHC_T00008935001_1|CHC_T00009531001_1|CHC_T00007910001_1|CHC_T00008400001|CHC_T00009531001|CHC_T00009142001|CHC_T00008400001_1|CHC_T00008935001}}
−
{{#set: ec number=EC-1.1.1.100}}
+
{{#set: in pathway=PWY-6837}}
−
{{#set: gene associated=CHC_T00008517001_1|CHC_T00008557001|CHC_T00008477001|CHC_T00008496001}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: in pathway=PWY-7664}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 17:40, 9 January 2019

Reaction RXN-12518

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-CoA oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6837, fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent): PWY-6837
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-12518&oldid=22103"