Difference between revisions of "GLUTDEHYD-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-287 RXN1G-287] == * direction: ** LEFT-TO-RIGHT * common name: ** cis-delta21-3-oxo-C40:1-[ac...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-287 RXN1G-287] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDEHYD-RXN GLUTDEHYD-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** cis-delta21-3-oxo-C40:1-[acyl-carrier protein] reductase
+
** Glutamate dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.M9 EC-1.1.1.M9]
+
** [http://enzyme.expasy.org/EC/1.4.1.4 EC-1.4.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[cis-delta21-3-oxo-C40-ACPs]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[cis-delta21-3-hydroxyC40-ACPs]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a cis-delta21-3-oxo-C40:1-[acp][c] '''+''' 1 NADPH[c] '''=>''' 1 a cis-delta21-3-hydroxyC40:1-[acp][c] '''+''' 1 NADP+[c]
+
** 1 H2O[c] '''+''' 1 NADP+[c] '''+''' 1 L-glutamate[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 ammonium[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00010235001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00010235001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
+
* [[GLUTSYNIII-PWY]], L-glutamate biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=GLUTSYNIII-PWY GLUTSYNIII-PWY]
−
** '''29''' reactions found over '''182''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-5675]], nitrate reduction V (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5675 PWY-5675]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[original_genome]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=cis-delta21-3-oxo-C40:1-[acyl-carrier protein] reductase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11612 11612]
−
{{#set: ec number=EC-1.1.1.M9}}
+
* UNIPROT:
−
{{#set: in pathway=PWYG-321}}
+
** [http://www.uniprot.org/uniprot/P07262 P07262]
−
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P15111 P15111]
−
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P28724 P28724]
−
{{#set: reconstruction source=original_genome}}
+
** [http://www.uniprot.org/uniprot/P43793 P43793]
 +
** [http://www.uniprot.org/uniprot/Q9JT56 Q9JT56]
 +
** [http://www.uniprot.org/uniprot/P00370 P00370]
 +
** [http://www.uniprot.org/uniprot/P00369 P00369]
 +
** [http://www.uniprot.org/uniprot/P29507 P29507]
 +
** [http://www.uniprot.org/uniprot/P28998 P28998]
 +
** [http://www.uniprot.org/uniprot/P29051 P29051]
 +
** [http://www.uniprot.org/uniprot/P31026 P31026]
 +
** [http://www.uniprot.org/uniprot/P39475 P39475]
 +
** [http://www.uniprot.org/uniprot/P39708 P39708]
 +
** [http://www.uniprot.org/uniprot/P54387 P54387]
 +
** [http://www.uniprot.org/uniprot/P54386 P54386]
 +
** [http://www.uniprot.org/uniprot/P95544 P95544]
 +
** [http://www.uniprot.org/uniprot/P78804 P78804]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00248 R00248]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Glutamate dehydrogenase}}
 +
{{#set: ec number=EC-1.4.1.4}}
 +
{{#set: gene associated=CHC_T00010235001|CHC_T00010235001_1}}
 +
{{#set: in pathway=GLUTSYNIII-PWY|PWY-5675|PWY490-3|PWY-5913}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:40, 9 January 2019

Reaction GLUTDEHYD-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Glutamate dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 NADP+[c] + 1 L-glutamate[c] <=> 1 2-oxoglutarate[c] + 1 ammonium[c] + 1 H+[c] + 1 NADPH[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • GLUTSYNIII-PWY, L-glutamate biosynthesis III: GLUTSYNIII-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5675, nitrate reduction V (assimilatory): PWY-5675
    • 3 reactions found over 4 reactions in the full pathway
  • PWY490-3, nitrate reduction VI (assimilatory): PWY490-3
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5913, partial TCA cycle (obligate autotrophs): PWY-5913
    • 10 reactions found over 11 reactions in the full pathway

Reconstruction information

External links





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